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See other GTF2H4 CNV Assays ›
Gene Symbol
GTF2H4
Assay Reference Genome
Location

Chr.6:30909072 on build GRCh38
Cytoband
6p21.33
Assay ID Hs02099919_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 2968

Gene Name:

 general transcription factor IIH subunit 4

Gene Aliases:

 P52, TFB2, TFIIH

Location:

 Chr.6:30908200-30914103 on Build GRCh38

Assay Gene Location:

 Within Exon 2
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
GTF2H4 NM_001517.4 2 243 NP_001508.1
AK222607.1 2 147 BAD96327.1
AK298058.1 2 291
AK300239.1
AK309869.1 2 257
BC004935.1 2 215 AAH04935.1
BC016302.2 2 215 AAH16302.1
BI460355.1 2 264
BT007321.1 AAP35985.1
Y07595.1 2 163 CAA68870.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv1074389 Chr.6:29116522 - 31446623 on Build GRCh38 Deletion GABBR1 MOG OR10C1 ZFP57 TRIM15 C6orf15 PPP1R10 FLOT1 LINC00243 C6orf136 SNORD32B MIR877 HLA-E NRM DHX16 LOC101929006 TCF19 HCG27 MIR4640 HLA-G LOC105375014 HLA-H HCG20 LOC554223 HLA-F RNF39 SFTA2 IFITM4P PRR3 HCG4B IER3 HCG4 DPCR1 RPP21 HLA-C HLA-K OR11A1 HCG22 TUBB TRIM10 HLA-F-AS1 PSORS1C1 HCG18 OR2J2 MDC1-AS1 CDSN OR12D2 OR12D3 OR14J1 HLA-B PPP1R11 HLA-A DDR1 POU5F1 TRIM40 MAS1L TRIM39-RPP21 TRIM39 ATAT1 CCHCR1 TRIM26 OR5V1 ZNRD1ASP VARS2 OR2H1 OR2H2 TRIM31 ABCF1 ZNRD1 PSORS1C3 HLA-L HCG17 UBD MUC21 GTF2H4 MUC22 TRIM31-AS1 HLA-J LINC01015 HCG9 MRPS18B PSORS1C2 MDC1 MIR6891 HCG8 MICA GNL1 PPP1R18
nsv601481 Chr.6:30454855 - 31316476 on Build GRCh38 Loss DDR1 POU5F1 C6orf15 PPP1R10 FLOT1 LINC00243 C6orf136 MIR877 HLA-E NRM DHX16 TCF19 HCG27 MIR4640 ATAT1 LOC105375014 CCHCR1 HCG20 VARS2 SFTA2 PRR3 ABCF1 IER3 PSORS1C3 DPCR1 HLA-C MUC21 HCG22 TUBB GTF2H4 MUC22 PSORS1C1 MDC1-AS1 CDSN MRPS18B PSORS1C2 MDC1 GNL1 PPP1R18
nsv1122126 Chr.6:28628023 - 31244023 on Build GRCh38 Deletion GABBR1 MOG OR10C1 LOC100129636 ZFP57 TRIM15 ZNF311 C6orf15 PPP1R10 FLOT1 LINC00243 C6orf136 SNORD32B MIR877 HLA-E NRM DHX16 LOC101929006 TCF19 HCG27 MIR4640 OR2W1 HLA-G LOC105375014 HLA-H HCG20 OR2B3 LOC554223 HLA-F RNF39 LINC01623 SFTA2 IFITM4P PRR3 HCG4B IER3 HCG4 DPCR1 RPP21 HLA-K OR11A1 HCG22 TUBB TRIM10 LINC01556 HLA-F-AS1 TRIM27 PSORS1C1 HCG18 OR2J2 MDC1-AS1 CDSN HCG16 OR12D2 OR12D3 OR14J1 HCG14 PPP1R11 HLA-A DDR1 POU5F1 TRIM40 MAS1L TRIM39-RPP21 TRIM39 LINC00533 OR2J3 ATAT1 CCHCR1 TRIM26 OR5V1 ZNRD1ASP VARS2 OR2H1 OR2H2 TRIM31 ABCF1 ZNRD1 PSORS1C3 HLA-L HCG17 UBD MUC21 GTF2H4 MUC22 TRIM31-AS1 HLA-J LINC01015 HCG9 MRPS18B PSORS1C2 MDC1 HCG8 GNL1 PPP1R18
nsv1144137 Chr.6:29720323 - 31338123 on Build GRCh38 Deletion TRIM15 C6orf15 PPP1R10 FLOT1 LINC00243 C6orf136 MIR877 HLA-E NRM DHX16 TCF19 HCG27 MIR4640 HLA-G LOC105375014 HLA-H HCG20 LOC554223 HLA-F RNF39 SFTA2 IFITM4P PRR3 HCG4B IER3 HCG4 DPCR1 RPP21 HLA-C HLA-K HCG22 TUBB TRIM10 HLA-F-AS1 PSORS1C1 HCG18 MDC1-AS1 CDSN PPP1R11 HLA-A DDR1 POU5F1 TRIM40 TRIM39-RPP21 TRIM39 ATAT1 CCHCR1 TRIM26 ZNRD1ASP VARS2 TRIM31 ABCF1 ZNRD1 PSORS1C3 HLA-L HCG17 MUC21 GTF2H4 MUC22 TRIM31-AS1 HLA-J HCG9 MRPS18B PSORS1C2 MDC1 HCG8 GNL1 PPP1R18
esv3608518 Chr.6:30889700 - 30987504 on Build GRCh38 Gain MIR4640 DDR1 DPCR1 MUC21 GTF2H4 VARS2 SFTA2
nsv601264 Chr.6:29883666 - 31320716 on Build GRCh38 Loss TRIM15 C6orf15 PPP1R10 FLOT1 LINC00243 C6orf136 MIR877 HLA-E NRM DHX16 TCF19 HCG27 MIR4640 LOC105375014 HLA-H HCG20 RNF39 SFTA2 PRR3 HCG4B IER3 DPCR1 RPP21 HLA-C HLA-K HCG22 TUBB TRIM10 PSORS1C1 HCG18 MDC1-AS1 CDSN PPP1R11 HLA-A DDR1 POU5F1 TRIM40 TRIM39-RPP21 TRIM39 ATAT1 CCHCR1 TRIM26 ZNRD1ASP VARS2 TRIM31 ABCF1 ZNRD1 PSORS1C3 HLA-L HCG17 MUC21 GTF2H4 MUC22 TRIM31-AS1 HLA-J HCG9 MRPS18B PSORS1C2 MDC1 HCG8 GNL1 PPP1R18
esv2731791 Chr.6:30404802 - 31346410 on Build GRCh38 Deletion DDR1 POU5F1 C6orf15 PPP1R10 FLOT1 LINC00243 C6orf136 MIR877 HLA-E NRM DHX16 TCF19 HCG27 MIR4640 ATAT1 LOC105375014 CCHCR1 HCG20 VARS2 SFTA2 PRR3 ABCF1 IER3 PSORS1C3 DPCR1 HLA-C MUC21 HCG22 TUBB GTF2H4 MUC22 PSORS1C1 MDC1-AS1 CDSN MRPS18B PSORS1C2 MDC1 GNL1 PPP1R18
esv2670269 Chr.6:30498650 - 31067145 on Build GRCh38 Deletion DDR1 PPP1R10 FLOT1 LINC00243 C6orf136 MIR877 NRM DHX16 MIR4640 ATAT1 LOC105375014 HCG20 VARS2 SFTA2 PRR3 ABCF1 IER3 DPCR1 MUC21 HCG22 TUBB GTF2H4 MUC22 MDC1-AS1 MRPS18B MDC1 GNL1 PPP1R18
esv3411275 Chr.6:29981607 - 31490616 on Build GRCh38 Duplication TRIM15 C6orf15 PPP1R10 FLOT1 LINC00243 C6orf136 MIR877 HLA-E NRM DHX16 TCF19 HCG27 MIR4640 LOC105375014 HCG20 RNF39 SFTA2 PRR3 IER3 DPCR1 RPP21 HCP5 HLA-C HCG22 TUBB TRIM10 PSORS1C1 HCG18 MDC1-AS1 CDSN HLA-B PPP1R11 LOC102725068 DDR1 POU5F1 TRIM40 TRIM39-RPP21 TRIM39 ATAT1 CCHCR1 TRIM26 ZNRD1ASP VARS2 TRIM31 ABCF1 ZNRD1 PSORS1C3 HLA-L HCG17 HCG26 MUC21 GTF2H4 MUC22 TRIM31-AS1 HLA-J MRPS18B PSORS1C2 MDC1 MIR6891 HCG8 MICA GNL1 PPP1R18
nsv525438 Chr.6:30897052 - 30966198 on Build GRCh38 Gain DDR1 DPCR1 GTF2H4 VARS2 SFTA2
nsv1031677 Chr.6:30889765 - 31005088 on Build GRCh38 Gain MIR4640 DDR1 DPCR1 MUC21 GTF2H4 VARS2 SFTA2

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