Hs02100527_cn

• Gene Symbol: TRPC4AP
• Assay Reference Genome Location: Chr.20:35004507 on build GRCh38
• Cytoband: 20q11.22

Target Gene Details

• Entrez Gene ID: 26133
• Gene Name: transient receptor potential cation channel subfamily C member 4 associated protein
• Gene Aliases: C20orf188, PPP1R158, TRRP4AP, TRUSS
• Location: Chr.20:35002404-35092837 on Build GRCh38
• Assay Gene Location: Within Exon 18

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
TRPC4AP	NM_015638.2	17	2034	NP_056453.1
	NM_199368.1	17	2010	NP_955400.1
	XM_011528774.1	12	1347	XP_011527076.1
	XM_017027799.1	17	2056	XP_016883288.1
	XM_017027800.1	16	1848	XP_016883289.1
	XM_017027801.1	15	1512	XP_016883290.1
	AF055022.1	8	737
	AK074106.1	16	2963	BAB84932.1
	AK298958.1	16	1981
	AK301368.1	9	953
	AK303476.1	16	1909
	AK315582.1	17	2026
	AL096738.1	1	2424
	AL117480.1	11	1290	CAB55953.1
	BC001323.1	6	547	AAH01323.1
	BC008836.2	4	400	AAH08836.2
	BC013144.1	17	2003	AAH13144.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv1063673	Chr.20:34977862 - 35009073 on Build GRCh38	Loss	TRPC4AP MYH7B MIR499B MIR499A
nsv1055447	Chr.20:34737641 - 35020344 on Build GRCh38	Loss	ACSS2 GGT7 TRPC4AP MYH7B MIR499B GSS HMGB3P1 MIR499A NCOA6
nsv833962	Chr.20:34927688 - 35113250 on Build GRCh38	Loss	ACSS2 TRPC4AP MYH7B MIR499B GSS MIR499A
nsv3362	Chr.20:34978502 - 35010725 on Build GRCh38	Insertion	TRPC4AP MYH7B MIR499B MIR499A

More Information

• Set Membership: Intragenic, Exonic, DGV Variation

Gene Ontology Categories:

Process(es)

ubiquitin-dependent protein catabolic process
protein ubiquitination
calcium ion transmembrane transport

Function(s)

calcium channel activity
protein binding
phosphatase binding