Hs02103206_cn

• Gene Symbol: SEPP1
• Assay Reference Genome Location: Chr.5:42808228 on build GRCh38
• Cytoband: 5p12

Target Gene Details

• Entrez Gene ID: 6414
• Gene Name: selenoprotein P, plasma, 1
• Gene Aliases: SELP, SEPP, SeP
• Location: Chr.5:42799880-42811922 on Build GRCh38
• Assay Gene Location: Within Exon 4

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
SEPP1	NM_001085486.1	3	255	NP_001078955.1
	NM_001093726.1	3	314	NP_001087195.1
	NM_005410.2	2	226	NP_005401.3
	AK096125.1	2	595
	AK225801.1	3	225
	AK311392.1	2	563
	AL833145.1	2	197
	AU136519.2	3	284
	BC015875.1	2	200	AAH15875.1
	BC040075.1	2	176	AAH40075.1
	BC046152.1	2	177	AAH46152.1
	BC058919.1	2	207	AAH58919.1
	BI463468.1	2	371
	Z11793.1	2	162

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
dgv5637n100	Chr.5:42609988 - 42844089 on Build GRCh38	Gain	SEPP1 CCDC152 GHR
nsv523033	Chr.5:42751935 - 42919583 on Build GRCh38	Gain	SEPP1 CCDC152
nsv597886	Chr.5:42610307 - 42854306 on Build GRCh38	Gain	SEPP1 CCDC152 GHR
nsv597925	Chr.5:42728729 - 43237086 on Build GRCh38	Gain	FLJ32255 NIM1K LOC648987 ANXA2R SEPP1 LOC153684 LOC100506639 CCDC152 LOC100132356 ZNF131

More Information

Additional Information:

For this assay, SNP(s) [rs72554691] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

• Set Membership: Intragenic, Exonic, DGV Variation

Gene Ontology Categories:

Process(es)

selenium compound metabolic process
platelet degranulation
response to oxidative stress
brain development
locomotory behavior
post-embryonic development
sexual reproduction
growth

Function(s)

selenium binding