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See other LMNTD2 CNV Assays ›
Gene Symbol
LMNTD2
Assay Reference Genome
Location

Chr.11:557919 on build GRCh38
Cytoband
11p15.5
Assay ID Hs02105282_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 256329

Gene Name:

 lamin tail domain containing 2

Gene Aliases:

 C11orf35

Location:

 Chr.11:554850-560780 on Build GRCh38

Assay Gene Location:

 Within Exon 6
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
LMNTD2 NM_173573.2 5 583 NP_775844.2
XM_011519965.2 5 758 XP_011518267.2
XM_011519967.2 5 758 XP_011518269.2
XM_017017476.1 5 758 XP_016872965.1
XM_017017477.1 5 743 XP_016872966.1
XM_017017478.1 5 599 XP_016872967.1
XM_017017479.1 5 758 XP_016872968.1
BC039077.1 5 583 AAH39077.1
BX384085.2 6 686

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv552854 Chr.11:511805 - 619789 on Build GRCh38 Loss MIR210 MIR210HG IRF7 LRRC56 HRAS PHRF1 CDHR5 LMNTD2 LOC101059906 LOC143666 RASSF7
dgv1523n54 Chr.11:557342 - 656940 on Build GRCh38 Gain MIR210 MIR210HG IRF7 SCT DEAF1 PHRF1 CDHR5 LMNTD2 DRD4 LOC143666 RASSF7
nsv527327 Chr.11:295343 - 620599 on Build GRCh38 Loss MIR210 MIR210HG IRF7 LRRC56 HRAS RNH1 PHRF1 CDHR5 IFITM3 ANO9 SIGIRR LOC101059906 B4GALNT4 IFITM1 PGGHG IFITM5 PTDSS2 PKP3 IFITM2 LMNTD2 LOC143666 RASSF7
nsv951270 Chr.11:528401 - 628100 on Build GRCh38 Deletion MIR210 MIR210HG IRF7 LRRC56 SCT HRAS PHRF1 CDHR5 LMNTD2 LOC101059906 LOC143666 RASSF7
nsv469923 Chr.11:378188 - 1302334 on Build GRCh38 Loss MUC2 MUC6 IRF7 LRRC56 MIR6744 HRAS PANO1 CDHR5 ANO9 PDDC1 LOC101059906 TMEM80 PTDSS2 PKP3 LMNTD2 AP2A2 TOLLIP LOC143666 MUC5B MIR210 MIR210HG TSPAN4 CEND1 POLR2L TALDO1 SCT SLC25A22 SNORA52 DEAF1 RNH1 PHRF1 LOC171391 PNPLA2 PIDD1 SIGIRR DRD4 B4GALNT4 RPLP2 EPS8L2 MUC5AC CRACR2B CHID1 LOC101927503 CD151 RASSF7
esv3625070 Chr.11:553728 - 559392 on Build GRCh38 Loss LRRC56 LMNTD2
esv2759794 Chr.11:409846 - 1336162 on Build GRCh38 Loss MUC2 MUC6 IRF7 LRRC56 MIR6744 HRAS PANO1 CDHR5 ANO9 PDDC1 LOC101059906 TMEM80 PTDSS2 LMNTD2 AP2A2 TOLLIP LOC143666 MUC5B MIR210 MIR210HG TSPAN4 CEND1 POLR2L TALDO1 SCT SLC25A22 SNORA52 DEAF1 RNH1 PHRF1 LOC171391 PNPLA2 PIDD1 SIGIRR DRD4 TOLLIP-AS1 RPLP2 EPS8L2 MUC5AC CRACR2B CHID1 LOC101927503 CD151 RASSF7
nsv1039558 Chr.11:534242 - 672091 on Build GRCh38 Gain MIR210 MIR210HG IRF7 LRRC56 SCT HRAS DEAF1 PHRF1 CDHR5 DRD4 LMNTD2 LOC143666 RASSF7
dgv182e199 Chr.11:349830 - 943372 on Build GRCh38 Deletion IRF7 LRRC56 HRAS PANO1 CDHR5 ANO9 PDDC1 LOC101059906 TMEM80 PTDSS2 PKP3 LMNTD2 AP2A2 LOC143666 MIR210 MIR210HG TSPAN4 CEND1 POLR2L TALDO1 SCT SLC25A22 SNORA52 DEAF1 RNH1 PHRF1 LOC171391 PNPLA2 PIDD1 SIGIRR DRD4 B4GALNT4 RPLP2 EPS8L2 CRACR2B CHID1 CD151 RASSF7
nsv1053964 Chr.11:491334 - 692433 on Build GRCh38 Gain MIR210 MIR210HG IRF7 LRRC56 SCT HRAS DEAF1 RNH1 PHRF1 CDHR5 DRD4 LOC101059906 PTDSS2 LMNTD2 LOC143666 RASSF7
nsv1159791 Chr.11:461793 - 909492 on Build GRCh38 Deletion IRF7 LRRC56 HRAS PANO1 CDHR5 PDDC1 LOC101059906 TMEM80 PTDSS2 LMNTD2 LOC143666 MIR210 MIR210HG TSPAN4 CEND1 POLR2L TALDO1 SCT SLC25A22 SNORA52 DEAF1 RNH1 PHRF1 LOC171391 PNPLA2 PIDD1 DRD4 RPLP2 EPS8L2 CRACR2B CHID1 CD151 RASSF7
nsv469924 Chr.11:549119 - 609887 on Build GRCh38 Gain MIR210 MIR210HG LRRC56 PHRF1 LMNTD2 LOC143666 RASSF7

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More Information


Set Membership:

 Intragenic Exonic DGV Variation

Gene Ontology Categories:

Function(s)


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