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See other CHID1 CNV Assays ›
Gene Symbol
CHID1
Assay Reference Genome
Location

Chr.11:869261 on build GRCh38
Cytoband
11p15.5
Assay ID Hs02106377_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 66005

Gene Name:

 chitinase domain containing 1

Gene Aliases:

 GL008, SI-CLP, SICLP

Location:

 Chr.11:867859-915058 on Build GRCh38

Assay Gene Location:

 Within Exon 19
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
CHID1 NM_001142674.1 14 2026 NP_001136146.1
NM_001142675.1 13 2136 NP_001136147.1
NM_001142676.1 14 1997 NP_001136148.1
NM_001142677.1 12 1829 NP_001136149.1
NM_023947.3 13 1922 NP_076436.3
AK027711.1 13 1871 BAB55316.1
AK124697.1 13 2498
AK301245.1
BC095409.1 13 1858 AAH95409.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
esv3625087 Chr.11:860117 - 882352 on Build GRCh38 Gain CHID1 TSPAN4
dgv1013n100 Chr.11:772982 - 933569 on Build GRCh38 Gain SNORA52 CHID1 CRACR2B PIDD1 SLC25A22 AP2A2 CEND1 LOC171391 POLR2L PNPLA2 RPLP2 PDDC1 CD151 PANO1 TSPAN4
esv2759794 Chr.11:409846 - 1336162 on Build GRCh38 Loss TOLLIP SNORA52 MUC5B IRF7 LRRC56 LOC143666 DRD4 MUC6 LMNTD2 CHID1 CRACR2B TMEM80 PHRF1 MIR210HG ANO9 MUC5AC SLC25A22 AP2A2 LOC101927503 CEND1 SCT LOC171391 POLR2L TOLLIP-AS1 SIGIRR RASSF7 LOC101059906 MIR6744 TSPAN4 HRAS DEAF1 MIR210 PIDD1 EPS8L2 PTDSS2 RNH1 PNPLA2 MUC2 RPLP2 CDHR5 PDDC1 CD151 PANO1 TALDO1
nsv552887 Chr.11:841284 - 876755 on Build GRCh38 Loss POLR2L CHID1 TSPAN4
dgv182e199 Chr.11:349830 - 943372 on Build GRCh38 Deletion SNORA52 IRF7 LRRC56 LOC143666 DRD4 LMNTD2 CHID1 CRACR2B TMEM80 PHRF1 MIR210HG ANO9 SLC25A22 AP2A2 CEND1 SCT PKP3 LOC171391 POLR2L SIGIRR RASSF7 LOC101059906 TSPAN4 HRAS DEAF1 MIR210 PIDD1 EPS8L2 PTDSS2 RNH1 PNPLA2 B4GALNT4 RPLP2 CDHR5 PDDC1 CD151 PANO1 TALDO1
esv2743878 Chr.11:864732 - 1489652 on Build GRCh38 Deletion TOLLIP MUC5B MUC6 CHID1 MOB2 MUC5AC AP2A2 LOC101927503 BRSK2 TOLLIP-AS1 MUC2 MIR6744 TSPAN4
nsv1159791 Chr.11:461793 - 909492 on Build GRCh38 Deletion SNORA52 IRF7 LRRC56 LOC143666 DRD4 LMNTD2 CHID1 CRACR2B TMEM80 PHRF1 MIR210HG SLC25A22 CEND1 SCT LOC171391 POLR2L RASSF7 LOC101059906 TSPAN4 HRAS DEAF1 MIR210 PIDD1 EPS8L2 PTDSS2 RNH1 PNPLA2 RPLP2 CDHR5 PDDC1 CD151 PANO1 TALDO1
nsv552871 Chr.11:766479 - 870446 on Build GRCh38 Loss SNORA52 CHID1 CRACR2B PIDD1 SLC25A22 CEND1 LOC171391 POLR2L PNPLA2 RPLP2 PDDC1 CD151 PANO1 TSPAN4
nsv469923 Chr.11:378188 - 1302334 on Build GRCh38 Loss TOLLIP SNORA52 MUC5B IRF7 LRRC56 LOC143666 DRD4 MUC6 LMNTD2 CHID1 CRACR2B TMEM80 PHRF1 MIR210HG ANO9 MUC5AC SLC25A22 AP2A2 LOC101927503 CEND1 SCT PKP3 LOC171391 POLR2L SIGIRR RASSF7 LOC101059906 MIR6744 TSPAN4 HRAS DEAF1 MIR210 PIDD1 EPS8L2 PTDSS2 RNH1 PNPLA2 B4GALNT4 MUC2 RPLP2 CDHR5 PDDC1 CD151 PANO1 TALDO1
dgv175e214 Chr.11:851409 - 1043855 on Build GRCh38 Gain AP2A2 MUC6 CHID1 TSPAN4
esv2669189 Chr.11:864834 - 1489637 on Build GRCh38 Deletion TOLLIP MUC5B MUC6 CHID1 MOB2 MUC5AC AP2A2 LOC101927503 BRSK2 TOLLIP-AS1 MUC2 MIR6744 TSPAN4
nsv832044 Chr.11:809019 - 938308 on Build GRCh38 Loss AP2A2 SNORA52 POLR2L CHID1 CRACR2B PNPLA2 RPLP2 PIDD1 CD151 TSPAN4
nsv1040044 Chr.11:776335 - 900929 on Build GRCh38 Gain+Loss SNORA52 CHID1 CRACR2B PIDD1 SLC25A22 CEND1 LOC171391 POLR2L PNPLA2 RPLP2 PDDC1 CD151 PANO1 TSPAN4
nsv1048774 Chr.11:816471 - 900929 on Build GRCh38 Gain POLR2L CHID1 CRACR2B PNPLA2 CD151 TSPAN4
nsv951272 Chr.11:751201 - 911500 on Build GRCh38 Deletion SNORA52 CHID1 CRACR2B PIDD1 SLC25A22 CEND1 LOC171391 POLR2L PNPLA2 RPLP2 PDDC1 CD151 PANO1 TALDO1 TSPAN4

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