Hs02118653_cn

• Gene Symbol: MEGF6
• Assay Reference Genome Location: Chr.1:3488490 on build GRCh38
• Cytoband: 1p36.32

Target Gene Details

• Entrez Gene ID: 1953
• Gene Name: multiple EGF like domains 6
• Gene Aliases: EGFL3
• Location: Chr.1:3487942-3624757 on Build GRCh38
• Assay Gene Location: Within Exon 41

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
MEGF6	NM_001409.3	37	6891	NP_001400.3
	XM_006710406.3	34	6526	XP_006710469.1
	XM_011540885.1	38	7196	XP_011539187.1
	XM_011540886.1	37	7067	XP_011539188.1
	XM_011540887.2	33	6404	XP_011539189.1
	XM_017000533.1	37	7064	XP_016856022.1
	AF086414.1	1	177
	BM984873.1	1	560

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
esv2758915	Chr.1:3372374 - 3632289 on Build GRCh38	Gain	MEGF6 PRDM16 TPRG1L MIR551A WRAP73 ARHGEF16
nsv470687	Chr.1:3356499 - 3763210 on Build GRCh38	Loss	MEGF6 PRDM16 TP73 TPRG1L MIR551A CCDC27 WRAP73 TP73-AS1 ARHGEF16
nsv1012423	Chr.1:3477686 - 4747449 on Build GRCh38	Gain	MEGF6 LINC01346 TP73 TPRG1L WRAP73 AJAP1 LOC284661 TP73-AS1 LINC01134 CEP104 C1orf174 SMIM1 MIR551A CCDC27 DFFB LRRC47 ARHGEF16
dgv7n67	Chr.1:3484509 - 3489098 on Build GRCh38	Gain	MEGF6
nsv951959	Chr.1:3051037 - 3812036 on Build GRCh38	Deletion	MEGF6 TP73 LINC00982 TPRG1L WRAP73 TP73-AS1 PRDM16 SMIM1 MIR551A CCDC27 MIR4251 LRRC47 LOC105378604 ARHGEF16
esv3893545	Chr.1:3460878 - 3512044 on Build GRCh38	Loss	MEGF6 ARHGEF16
nsv830203	Chr.1:3446374 - 3607752 on Build GRCh38	Loss	MEGF6 MIR551A ARHGEF16
nsv545124	Chr.1:3451579 - 3488732 on Build GRCh38	Loss	MEGF6 ARHGEF16
nsv299	Chr.1:3476928 - 3512705 on Build GRCh38	Insertion	MEGF6 ARHGEF16

More Information

• Set Membership: Intragenic, Exonic, DGV Variation

Panther Classification:

Molecular Function -

extracellular matrix protein

Gene Ontology Categories:

Process(es)

biological_process

Function(s)

calcium ion binding
protein binding