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See other GJC2 CNV Assays ›
Gene Symbol
GJC2
Assay Reference Genome
Location

Chr.1:228149972 on build GRCh38
Cytoband
1q42.13
Assay ID Hs02155010_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 57165

Gene Name:

 gap junction protein gamma 2

Gene Aliases:

 CX46.6, Cx47, GJA12, HLD2, LMPH1C, PMLDAR, SPG44

Location:

 Chr.1:228149714-228159826 on Build GRCh38

Assay Gene Location:

 Overlaps Exon 1 - Intron 1
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
GJC2 NM_020435.3 NP_065168.2
BC035840.1 AAH35840.1
BC089439.1 AAH89439.1
CF132637.1
EU433401.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv952137 Chr.1:228140600 - 228182899 on Build GRCh38 Deletion IBA57-AS1 GUK1 GJC2 IBA57
nsv1160102 Chr.1:228081212 - 228239280 on Build GRCh38 Deletion OBSCN IBA57-AS1 GUK1 C1orf145 C1orf35 ARF1 MRPL55 GJC2 IBA57 MIR3620
nsv826908 Chr.1:227707685 - 228503399 on Build GRCh38 Gain SNAP47 ARF1 TRIM11 MRPL55 IBA57 WNT3A TRIM17 IBA57-AS1 GUK1 C1orf35 WNT9A LOC105373289 MIR4666A JMJD4 LOC101060022 RNF187 MIR5008 C1orf145 MIR6742 HIST3H3 GJC2 LOC101927401 HIST3H2A OBSCN PRSS38 LOC100506571 LOC107985355 MIR3620 HIST3H2BB
esv32853 Chr.1:227692415 - 228670462 on Build GRCh38 Gain LOC105373132 SNAP47 ARF1 TRIM11 MRPL55 RHOU TRIM17 IBA57-AS1 WNT9A JMJD4 RNF187 MIR5008 RNA5S12 MIR6742 HIST3H3 RNA5S17 HIST3H2A RNA5S15 PRSS38 RNA5S16 RNA5S1 LOC107985355 DUSP5P1 MIR3620 HIST3H2BB RNA5S5 IBA57 WNT3A RNA5S13 RNA5S8 RNA5S6 GUK1 C1orf35 LOC105373289 MIR4666A LOC101060022 RNA5S7 RNA5S2 BTNL10 RNA5S4 C1orf145 RNA5S14 GJC2 LOC101927401 OBSCN RNA5S3 RNA5S11 RNA5S10 LOC100506571 RNA5S9
nsv827019 Chr.1:228126466 - 228463319 on Build GRCh38 Loss C1orf145 TRIM11 MIR6742 HIST3H3 GJC2 LOC101927401 IBA57 HIST3H2A OBSCN TRIM17 IBA57-AS1 GUK1 MIR4666A HIST3H2BB
nsv523935 Chr.1:227850423 - 228494048 on Build GRCh38 Loss ARF1 TRIM11 MRPL55 IBA57 WNT3A TRIM17 IBA57-AS1 GUK1 C1orf35 WNT9A MIR4666A LOC101060022 RNF187 MIR5008 C1orf145 MIR6742 HIST3H3 GJC2 LOC101927401 HIST3H2A OBSCN LOC100506571 LOC107985355 MIR3620 HIST3H2BB
dgv839n54 Chr.1:228139958 - 228183397 on Build GRCh38 Loss IBA57-AS1 GUK1 GJC2 IBA57
nsv549290 Chr.1:228145951 - 228162105 on Build GRCh38 Loss GUK1 GJC2

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More Information


Set Membership:

 Intragenic Non-exonic DGV Variation

Panther Classification:

Molecular Function -

gap junction

Gene Ontology Categories:

Function(s) Process(es)


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