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See other GJC2 CNV Assays ›
Gene Symbol
GJC2
Assay Reference Genome
Location

Chr.1:228149972 on build GRCh38
Cytoband
1q42.13
Assay ID Hs02155010_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 57165

Gene Name:

 gap junction protein gamma 2

Gene Aliases:

 CX46.6, Cx47, GJA12, HLD2, LMPH1C, PMLDAR, SPG44

Location:

 Chr.1:228149714-228159826 on Build GRCh38

Assay Gene Location:

 Overlaps Exon 1 - Intron 1
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
GJC2 NM_020435.3 NP_065168.2
BC035840.1 AAH35840.1
BC089439.1 AAH89439.1
CF132637.1
EU433401.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv952137 Chr.1:228140600 - 228182899 on Build GRCh38 Deletion GUK1 IBA57 GJC2 IBA57-AS1
nsv826908 Chr.1:227707685 - 228503399 on Build GRCh38 Gain C1orf35 HIST3H2A TRIM17 TRIM11 LOC101060022 ARF1 MIR3620 IBA57 OBSCN GUK1 SNAP47 LOC105373289 WNT9A C1orf145 MIR4666A MIR5008 HIST3H2BB LOC107985355 LOC100506571 IBA57-AS1 WNT3A JMJD4 RNF187 HIST3H3 PRSS38 GJC2 LOC101927401 MIR6742 MRPL55
nsv1160102 Chr.1:228081212 - 228239280 on Build GRCh38 Deletion GUK1 C1orf35 ARF1 C1orf145 MIR3620 IBA57 GJC2 IBA57-AS1 OBSCN MRPL55
esv32853 Chr.1:227692415 - 228670462 on Build GRCh38 Gain C1orf35 RNA5S11 RNA5S10 BTNL10 LOC101060022 RNA5S5 DUSP5P1 GUK1 RHOU SNAP47 RNA5S9 LOC107985355 RNA5S2 RNA5S4 IBA57-AS1 WNT3A RNF187 HIST3H3 PRSS38 RNA5S6 GJC2 LOC101927401 MIR6742 HIST3H2A RNA5S7 TRIM17 TRIM11 RNA5S17 ARF1 MIR3620 IBA57 RNA5S8 OBSCN LOC105373289 WNT9A C1orf145 MIR4666A MIR5008 HIST3H2BB RNA5S12 RNA5S16 LOC100506571 RNA5S1 JMJD4 RNA5S13 LOC105373132 RNA5S15 RNA5S14 RNA5S3 MRPL55
nsv827019 Chr.1:228126466 - 228463319 on Build GRCh38 Loss GUK1 C1orf145 MIR4666A HIST3H2BB HIST3H2A IBA57-AS1 TRIM17 TRIM11 HIST3H3 IBA57 GJC2 LOC101927401 MIR6742 OBSCN
nsv523935 Chr.1:227850423 - 228494048 on Build GRCh38 Loss C1orf35 HIST3H2A TRIM17 TRIM11 LOC101060022 ARF1 MIR3620 IBA57 OBSCN GUK1 WNT9A C1orf145 MIR4666A MIR5008 HIST3H2BB LOC107985355 LOC100506571 IBA57-AS1 WNT3A RNF187 HIST3H3 GJC2 LOC101927401 MIR6742 MRPL55
dgv839n54 Chr.1:228139958 - 228183397 on Build GRCh38 Loss GUK1 IBA57 GJC2 IBA57-AS1
nsv549290 Chr.1:228145951 - 228162105 on Build GRCh38 Loss GUK1 GJC2

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More Information


Set Membership:

 Intragenic Non-exonic DGV Variation

Panther Classification:

Molecular Function -

gap junction

Gene Ontology Categories:

Function(s) Process(es)


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