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Gene Symbol
SPSB3
Assay Reference Genome
Location

Chr.16:1777240 on build GRCh38
Cytoband
16p13.3
Assay ID Hs02156110_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 90864

Gene Name:

 splA/ryanodine receptor domain and SOCS box containing 3

Gene Aliases:

 C16orf31, SSB3

Location:

 Chr.16:1776712-1782605 on Build GRCh38

Assay Gene Location:

 Within Exon 8
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
SPSB3 NM_001324081.1 7 994 NP_001311010.1
NM_080861.3 7 1016 NP_543137.2
XM_005255673.4 7 1206 XP_005255730.1
AF403028.1 6 925 AAL57347.1
AK074190.1 7 980
BC007588.1 7 962
BC024244.1 7 980 AAH24244.1
BC041897.1 6 1790 AAH41897.1
BC047441.1 7 958
BQ930544.1 2 298

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv571169 Chr.16:1729694 - 1789022 on Build GRCh38 Loss SPSB3 MRPS34 EME2 MIR3177 NUBP2 MAPK8IP3 NME3
esv2422427 Chr.16:10001 - 2723164 on Build GRCh38 Duplication DDX11L10 PRSS27 BAIAP3 HBZ LINC00254 RPS2 PRR25 SSTR5 METTL26 SNORD60 MIR662 LOC100134368 C16orf91 LOC105371046 MIR1225 HBQ1 SOX8 C1QTNF8 LOC107987233 TMEM204 RNF151 PKD1 LOC105371038 BRICD5 RHOT2 MAPK8IP3 GNPTG CCDC154 DNASE1L2 TBL3 MRPS34 CASKIN1 RPL23AP5 CRAMP1 RGS11 SNORA78 EME2 GFER SNRNP25 DECR2 PRSS29P TMEM8A SPSB3 LMF1-AS1 CEMP1 WASIR2 UNKL MEIOB SLC9A3R2 TPSB2 LOC101929280 AMDHD2 POLR3K WDR90 SYNGR3 MIR4516 TBC1D24 HAGH MIR6768 RPUSD1 GNG13 HBA2 MIR3176 MIR3177 LOC105371184 KCTD5 RHBDL1 PGP CCNF LMF1 ABCA3 MIR6511B1 PDPK1 MSLN NOXO1 FAM173A LOC107984876 WDR24 HBM PTX4 RNPS1 UBE2I PDIA2 LUC7L MPG NME3 TRAF7 TELO2 CLCN7 CACNA1H RPL3L MSRB1 RAB11FIP3 CAPN15 MRPL28 MIR6859-4 SNHG19 LOC652276 E4F1 FLJ42627 LOC105371045 PIGQ LOC105371047 SNHG9 NPW TPSD1 HAGHL RHBDF1 RAB40C TPSG1 TSR3 JMJD8 WFIKKN1 C16orf59 CHTF18 SSTR5-AS1 HN1L STUB1 LINC00235 ZNF598 AXIN1 NUBP2 TSC2 SNORA64 HS3ST6 HBA1 FBXL16 FAM234A LOC100287175 NHLRC4 IFT140 NME4 METRN LOC729652 TPSAB1 ERVK13-1 NTHL1 MIR940 NTN3 MIR6767 NDUFB10 MIR3178 CCDC78 MIR3180-5 ECI1 MIR4717 RAB26 LOC106660606 NARFL LOC105371049 ARHGDIG SNORA10 FAHD1 PRR35 MIR5587 MCRIP2 MIR3677 ATP6V0C MLST8 IGFALS ABCA17P NPRL3
nsv571172 Chr.16:1764390 - 1817039 on Build GRCh38 Loss SPSB3 MRPS34 HAGH EME2 NUBP2 IGFALS MAPK8IP3 NME3
nsv1160328 Chr.16:1704619 - 1797867 on Build GRCh38 Deletion SPSB3 MRPS34 EME2 MIR3177 NUBP2 IGFALS MAPK8IP3 NME3
nsv571171 Chr.16:1757779 - 1804539 on Build GRCh38 Gain+Loss SPSB3 MRPS34 EME2 NUBP2 IGFALS MAPK8IP3 NME3
dgv4856n54 Chr.16:1600945 - 1813519 on Build GRCh38 Loss HAGH EME2 MIR3177 MAPK8IP3 NME3 IFT140 SPSB3 HN1L MRPS34 LOC105371046 NUBP2 IGFALS CRAMP1
nsv471069 Chr.16:1754356 - 1791032 on Build GRCh38 Loss SPSB3 MRPS34 EME2 NUBP2 IGFALS MAPK8IP3 NME3
nsv1051692 Chr.16:1505070 - 1866102 on Build GRCh38 Loss TMEM204 HAGH LOC105371047 EME2 MIR3177 MAPK8IP3 NME3 IFT140 FAHD1 SPSB3 HN1L TELO2 MRPS34 LOC105371046 MEIOB NUBP2 IGFALS CRAMP1
nsv827500 Chr.16:1761258 - 1795126 on Build GRCh38 Gain SPSB3 MRPS34 EME2 NUBP2 IGFALS MAPK8IP3 NME3
nsv571173 Chr.16:1767596 - 1780436 on Build GRCh38 Loss SPSB3 MRPS34 EME2 MAPK8IP3 NME3
nsv518641 Chr.16:1645775 - 1835631 on Build GRCh38 Loss HAGH EME2 MIR3177 MAPK8IP3 NME3 FAHD1 SPSB3 HN1L MRPS34 MEIOB NUBP2 IGFALS CRAMP1
nsv457336 Chr.16:1752231 - 1791032 on Build GRCh38 Loss SPSB3 MRPS34 EME2 NUBP2 IGFALS MAPK8IP3 NME3
nsv952900 Chr.16:1724500 - 1827999 on Build GRCh38 Deletion FAHD1 SPSB3 MRPS34 HAGH EME2 MIR3177 NUBP2 IGFALS MAPK8IP3 NME3

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More Information


Set Membership:

 Intragenic Exonic DGV Variation

Gene Ontology Categories:

Function(s) Process(es)


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