Name: [Hs02166529_cn] [LINGO1]
Creator: Thermo Fisher Scientific
Keywords: [LINGO1] Assay, [leucine rich repeat and Ig domain containing 1] Assay

Genomic Map

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Assay Details

Target Gene Details

Entrez Gene ID:	84894
Gene Name:	leucine rich repeat and Ig domain containing 1
Gene Aliases:	LERN1, LRRN6A, UNQ201
Location:	Chr.15:77613024-77820900 on Build GRCh38
Assay Gene Location:	Within Exon 17

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
LINGO1	NM_001301186.1	6	2666	NP_001288115.1
	NM_001301187.1	6	2683	NP_001288116.1
	NM_001301189.1	6	2677	NP_001288118.1
	NM_001301191.1	6	2862	NP_001288120.1
	NM_001301192.1	5	2800	NP_001288121.1
	NM_001301194.1	4	2618	NP_001288123.1
	NM_001301195.1	4	2553	NP_001288124.1
	NM_001301197.1	4	2566	NP_001288126.1
	NM_001301198.1	3	2363	NP_001288127.1
	NM_001301199.1	4	2536	NP_001288128.1
	NM_001301200.1	4	2609	NP_001288129.1
	NM_032808.6	2	2381	NP_116197.4
	XM_011522118.2	2	2293	XP_011520420.1
	XM_017022682.1	7	3009	XP_016878171.1
	AK027500.1	1	1314	BAB55157.1
	AL109677.1
	AL834260.1	1	2041	CAD38935.1
	AY324320.1	2	2221	AAQ97216.1
	AY324322.1			AAQ97217.1
	AY358284.1			AAQ88651.1
	BC011057.1			AAH11057.2
	BC068558.1			AAH68558.1
	H11343.1
	HY342106.1

Target Copy Number Variation Details

DGV Version:

Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv833060	Chr.15:77524312 - 77742862 on Build GRCh38	Gain	LINGO1-AS2 LINGO1 LINGO1-AS1 LOC101929457
nsv1036749	Chr.15:77591684 - 77620066 on Build GRCh38	Gain	LINGO1
esv2749898	Chr.15:75764003 - 77933523 on Build GRCh38	Deletion	ETFA TSPAN3 LINGO1-AS2 FBXO22-AS1 LOC441728 LINGO1 PSTPIP1 HMG20A UBE2Q2 TMEM266 LOC645752 LINC00597 FBXO22 PEAK1 LINGO1-AS1 TYRO3P NRG4 LOC101929457 MIR3713 ISL2 RCN2 LOC101929439 SCAPER
nsv1040852	Chr.15:76867896 - 77845199 on Build GRCh38	Gain	LINC00597 TSPAN3 LINGO1-AS2 PEAK1 LINGO1 LINGO1-AS1 PSTPIP1 LOC101929457 HMG20A RCN2 SCAPER