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See other PLEKHN1 CNV Assays ›
Gene Symbol
PLEKHN1
Assay Reference Genome
Location

Chr.1:970307 on build GRCh38
Cytoband
1p36.33
Assay ID Hs02167602_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 84069

Gene Name:

 pleckstrin homology domain containing N1

Gene Aliases:

 -

Location:

 Chr.1:965820-975108 on Build GRCh38

Assay Gene Location:

 Overlaps Intron 2 - Exon 3
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
PLEKHN1 NM_001160184.1 NP_001153656.1
NM_032129.2 NP_115505.2
XM_006710944.3 XP_006711007.2
XM_011542248.2 XP_011540550.2
XM_017002474.1 XP_016857963.1
XM_017002475.1 XP_016857964.1
XM_017002476.1 XP_016857965.1
XM_017002477.1 XP_016857966.1
XM_017002478.1 XP_016857967.1
XM_017002479.1 XP_016857968.1
AL136730.1 CAB66664.1
BC101386.2 AAI01387.1
BC101387.2 AAI01388.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
esv2762302 Chr.1:914637 - 1106320 on Build GRCh38 Gain HES4 LOC100288175 SAMD11 PERM1 RNF223 PLEKHN1 ISG15 C1orf159 LOC107985728 NOC2L LOC105378948 AGRN LOC100130417 LOC284600 KLHL17
nsv482937 Chr.1:10001 - 2368561 on Build GRCh38 Loss LOC100288175 PRKCZ PERM1 LOC102724312 CFAP74 MIR6808 ATAD3B LOC105378589 CPSF3L LOC100130417 OR4F29 LOC105378592 LOC100288069 MTND2P28 KLHL17 LOC105378949 DVL1 LOC102725121 SCNN1D FAM41C MORN1 C1orf159 CCNL2 TTLL10 FAM132A CDK11A MMP23A ATAD3C MIR200A MIR429 HES4 LINC00115 GABRD MIR200B LOC101928626 FAM87B FNDC10 TNFRSF18 OR4F5 LOC100132287 GNB1 LOC100287934 MIR6859-1 NADK ACAP3 TNFRSF4 LOC105378948 MMP23B LINC01342 ANKRD65 FAM138A LINC01128 TTLL10-AS1 AURKAIP1 VWA1 AGRN LOC105378947 LOC107984841 LOC284600 LOC100134822 DDX11L1 LOC107985729 MIR6726 CPTP CALML6 MXRA8 MIB2 PUSL1 TMEM240 SSU72 TAS1R3 LOC100506504 SAMD11 RNF223 LOC729737 MIR6859-2 OR4F16 MIR1302-2 ISG15 MIR6723 ATAD3A TMEM88B CDK11B WASH7P SKI B3GALT6 LOC105378591 MTND1P23 PLEKHN1 SLC35E2B SLC35E2 TMEM52 LOC107985728 NOC2L SDF4 LOC148413 FAAP20 MIR6727 UBE2J2 LOC100133331 MRPL20 LOC100129534
nsv950451 Chr.1:899421 - 1094520 on Build GRCh38 Deletion HES4 LOC100288175 SAMD11 PERM1 RNF223 PLEKHN1 ISG15 C1orf159 LOC107985728 NOC2L LOC105378948 AGRN LOC100130417 LOC284600 KLHL17
nsv509035 Chr.1:891406 - 985724 on Build GRCh38 Insertion LOC100130417 SAMD11 PERM1 PLEKHN1 LOC284600 LOC107985728 NOC2L KLHL17
nsv428334 Chr.1:874371 - 1220569 on Build GRCh38 Gain MIR429 HES4 LOC100288175 SAMD11 PERM1 RNF223 MIR200B ISG15 TTLL10-AS1 AGRN LOC100130417 TNFRSF18 LOC284600 KLHL17 FAM41C PLEKHN1 C1orf159 LOC107985728 NOC2L SDF4 TNFRSF4 LOC105378948 TTLL10 LINC01342 MIR200A
dgv5n100 Chr.1:585989 - 1114424 on Build GRCh38 Gain HES4 LINC00115 LOC100288175 SAMD11 PERM1 RNF223 OR4F16 ISG15 LOC101928626 MIR6723 LINC01128 AGRN FAM87B LOC105378947 LOC100130417 LOC100288069 LOC107984841 LOC284600 MTND2P28 KLHL17 MTND1P23 FAM41C PLEKHN1 LOC100287934 C1orf159 LOC107985728 NOC2L LOC105378948 LOC100133331
nsv10161 Chr.1:776731 - 1777210 on Build GRCh38 Gain+Loss LOC100288175 PERM1 ANKRD65 LOC102724312 MIR6808 ATAD3B LINC01128 TTLL10-AS1 AURKAIP1 VWA1 CPSF3L AGRN LOC100130417 LOC100288069 LOC284600 LOC107985729 KLHL17 DVL1 MIR6726 SCNN1D CPTP FAM41C MXRA8 MIB2 PUSL1 C1orf159 TMEM240 SSU72 CCNL2 TTLL10 TAS1R3 FAM132A CDK11A MMP23A ATAD3C MIR200A MIR429 HES4 LINC00115 SAMD11 RNF223 MIR200B ISG15 ATAD3A FAM87B FNDC10 TMEM88B TNFRSF18 CDK11B B3GALT6 PLEKHN1 LOC100287934 SLC35E2B SLC35E2 LOC107985728 NOC2L SDF4 NADK ACAP3 TNFRSF4 LOC105378948 MMP23B LOC148413 MIR6727 LINC01342 UBE2J2 MRPL20
nsv517709 Chr.1:817186 - 1275912 on Build GRCh38 Gain+Loss MIR429 HES4 LINC00115 LOC100288175 SAMD11 PERM1 RNF223 MIR200B ISG15 LINC01128 TTLL10-AS1 AGRN FAM87B LOC100130417 TNFRSF18 LOC284600 B3GALT6 KLHL17 FAM41C PLEKHN1 C1orf159 LOC107985728 NOC2L SDF4 TNFRSF4 LOC105378948 TTLL10 FAM132A LINC01342 UBE2J2 MIR200A
nsv1013524 Chr.1:939510 - 1161955 on Build GRCh38 Gain HES4 LOC100288175 SAMD11 PERM1 RNF223 PLEKHN1 ISG15 C1orf159 NOC2L LOC105378948 AGRN LINC01342 KLHL17
dgv2n67 Chr.1:877618 - 1426500 on Build GRCh38 Gain MIR429 HES4 LOC100288175 SAMD11 PERM1 ANKRD65 RNF223 MIR200B ISG15 MIR6808 TTLL10-AS1 AURKAIP1 CPSF3L AGRN LOC100130417 TMEM88B TNFRSF18 LOC284600 B3GALT6 KLHL17 DVL1 MIR6726 SCNN1D CPTP MXRA8 PUSL1 PLEKHN1 C1orf159 LOC107985728 NOC2L SDF4 CCNL2 ACAP3 TNFRSF4 LOC105378948 TTLL10 TAS1R3 LOC148413 FAM132A MIR6727 LINC01342 UBE2J2 MIR200A MRPL20
nsv544895 Chr.1:917392 - 1054900 on Build GRCh38 Loss HES4 AGRN LOC100130417 SAMD11 PERM1 PLEKHN1 LOC284600 ISG15 LOC107985728 NOC2L KLHL17
nsv1160644 Chr.1:939652 - 1220663 on Build GRCh38 Deletion MIR429 HES4 LOC100288175 SAMD11 PERM1 RNF223 PLEKHN1 MIR200B ISG15 C1orf159 TTLL10-AS1 NOC2L SDF4 TNFRSF4 LOC105378948 AGRN TNFRSF18 TTLL10 LINC01342 KLHL17 MIR200A
nsv832980 Chr.1:848279 - 1007037 on Build GRCh38 Gain HES4 FAM41C LOC100130417 SAMD11 PERM1 PLEKHN1 LOC284600 LINC01128 LOC107985728 NOC2L KLHL17

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More Information


Set Membership:

 Intragenic Non-exonic DGV Variation

Gene Ontology Categories:

Process(es)


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