Genomic Map
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Target Gene Details
Entrez Gene ID: | 284415 |
Gene Name: | V-set and transmembrane domain containing 1 |
Gene Aliases: |
SIRL-1, SIRL1, UNQ3033 |
Location: |
Chr.19:54040825-54063966 on Build GRCh38 |
Assay Gene Location: | Overlaps Intron 2 - Exon 3 |
| Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
|---|---|---|---|---|
| VSTM1 | NM_001288791.1 | NP_001275720.1 | ||
| NM_001288792.1 | NP_001275721.1 | |||
| NM_001288793.1 | NP_001275722.1 | |||
| NM_198481.3 | NP_940883.2 | |||
| NR_110142.1 | ||||
| XM_011526845.1 | XP_011525147.1 | |||
| XM_011526846.1 | XP_011525148.1 | |||
| XM_011526847.1 | XP_011525149.1 | |||
| XM_011526848.1 | XP_011525150.1 | |||
| XM_011526849.1 | XP_011525151.1 | |||
| XM_017026666.1 | XP_016882155.1 | |||
| AY358542.1 | AAQ88906.1 | |||
| BC100943.2 | AAI00944.1 | |||
| DQ479397.1 | ||||
| FJ584316.1 | ||||
| FJ584317.1 | ||||
| FJ584318.1 | ||||
| FJ584319.1 | ||||
| FJ584320.1 | ||||
| FJ882051.1 | ||||
| FN398145.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
| Target Variation |
Location | CNV Subtype |
Genes |
|---|---|---|---|
| nsv458782 | Chr.19:53961144 - 54093354 on Build GRCh38 | Gain |
 VSTM1
TARM1
CACNG6
MIR935
CACNG8
|
| nsv510773 | Chr.19:54017180 - 54132236 on Build GRCh38 | Deletion |
NDUFA3
VSTM1
TARM1
PRPF31
TFPT
OSCAR
|
| nsv182 | Chr.19:54050737 - 54097924 on Build GRCh38 | Deletion |
VSTM1
TARM1
OSCAR
|
| nsv1063127 | Chr.19:53926876 - 54068977 on Build GRCh38 | Gain |
CACNG7
VSTM1
CACNG6
MIR935
CACNG8
|
| nsv9750 | Chr.19:54049927 - 54058628 on Build GRCh38 | Gain |
VSTM1
|
| esv2718812 | Chr.19:53184636 - 54322450 on Build GRCh38 | Deletion |
ZNF331
MYADM
LILRB2
MIR1283-1
MIR512-1
MIR520H
ZNF818P
ZNF845
MIR522
MIR516A1
VN1R2
MIR518A1
MIR526A2
MIR517B
VN1R4
TFPT
MIR515-2
MIR526B
ZNF677
MBOAT7
MIR518C
MIR371A
PRPF31
MIR935
CACNG8
PRKCG
ZNF765
NLRP12
MIR520C
MIR1323
MIR520B
LILRB3
MIR520G
CNOT3
LILRB5
MIR521-1
DPRX
CACNG6
MIR517C
ZNF525
MIR518F
MIR518B
MIR518D
MIR527
CACNG7
MIR517A
MIR519C
MIR519D
LILRA6
MIR498
MIR526A1
LILRA5
MIR516B2
MIR519E
MIR524
TPM3P9
ZNF665
MIR525
TSEN34
ZNF813
MIR371B
LOC284379
MIR518E
MIR372
OSCAR
MIR520A
LENG1
MIR521-2
MIR515-1
ZNF761
MIR516B1
MIR1283-2
MIR373
MIR520D
RPS9
BIRC8
NDUFA3
MIR516A2
VSTM1
TARM1
MIR4752
MIR512-2
MIR520E
MIR518A2
MIR519A1
LOC105372457
TMC4
MIR519B
MIR520F
MIR523
MIR519A2
FAM90A27P
|
| dgv663e199 | Chr.19:54051591 - 54059132 on Build GRCh38 | Deletion |
VSTM1
|
| esv3644780 | Chr.19:54057724 - 54066399 on Build GRCh38 | Gain |
VSTM1
|
| nsv833877 | Chr.19:53951529 - 54117323 on Build GRCh38 | Loss |
NDUFA3
VSTM1
TARM1
PRPF31
CACNG6
TFPT
MIR935
CACNG8
OSCAR
|
Back To TopMore Information
Set Membership: |
Intragenic
Non-exonic
DGV Variation
|
Panther Classification:
Gene Ontology Categories:
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