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See other PLEKHN1 CNV Assays ›
Gene Symbol
PLEKHN1
Assay Reference Genome
Location

Chr.1:972335 on build GRCh38
Cytoband
1p36.33
Assay ID Hs02201831_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 84069

Gene Name:

 pleckstrin homology domain containing N1

Gene Aliases:

 -

Location:

 Chr.1:965820-975108 on Build GRCh38

Assay Gene Location:

 Overlaps Intron 8 - Exon 9
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
PLEKHN1 NM_001160184.1 NP_001153656.1
NM_032129.2 NP_115505.2
XM_006710944.3 XP_006711007.2
XM_011542248.2 XP_011540550.2
XM_017002474.1 XP_016857963.1
XM_017002475.1 XP_016857964.1
XM_017002476.1 XP_016857965.1
XM_017002477.1 XP_016857966.1
XM_017002478.1 XP_016857967.1
XM_017002479.1 XP_016857968.1
AL136730.1 CAB66664.1
BC101386.2 AAI01387.1
BC101387.2 AAI01388.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
esv2762302 Chr.1:914637 - 1106320 on Build GRCh38 Gain LOC105378948 PLEKHN1 ISG15 LOC284600 KLHL17 HES4 LOC100288175 RNF223 AGRN PERM1 LOC100130417 NOC2L SAMD11 C1orf159 LOC107985728
nsv482937 Chr.1:10001 - 2368561 on Build GRCh38 Loss DVL1 AGRN MMP23B LOC105378592 ATAD3C NOC2L LOC101928626 LOC105378589 PUSL1 HES4 MIR6859-1 MIR200B MIR429 TNFRSF4 MIR200A GNB1 PRKCZ LOC100506504 LOC100132287 KLHL17 LOC100288175 ATAD3B B3GALT6 UBE2J2 SDF4 ANKRD65 MORN1 MTND2P28 SAMD11 SLC35E2B LOC105378949 CCNL2 MIR1302-2 MRPL20 CPTP DDX11L1 LOC100133331 LOC100130417 LOC100288069 CALML6 SCNN1D WASH7P FAM41C VWA1 MIR6723 MXRA8 FAM138A MTND1P23 LINC01128 MIR6727 LOC100287934 PERM1 TNFRSF18 TMEM240 OR4F29 LOC105378947 CFAP74 FAM132A CDK11A GABRD MIR6859-2 ATAD3A SKI CPSF3L PLEKHN1 FNDC10 ACAP3 LOC284600 LOC105378591 AURKAIP1 RNF223 CDK11B LOC102725121 MIB2 MIR6808 SLC35E2 ISG15 TAS1R3 TMEM88B SSU72 TTLL10 FAAP20 MIR6726 C1orf159 NADK OR4F16 LOC107985728 LOC105378948 TMEM52 OR4F5 TTLL10-AS1 LINC01342 LOC100129534 LOC148413 LOC729737 LINC00115 LOC107984841 FAM87B LOC100134822 LOC102724312 LOC107985729 MMP23A
nsv950451 Chr.1:899421 - 1094520 on Build GRCh38 Deletion LOC105378948 PLEKHN1 ISG15 LOC284600 KLHL17 HES4 LOC100288175 RNF223 AGRN PERM1 LOC100130417 NOC2L SAMD11 C1orf159 LOC107985728
nsv509035 Chr.1:891406 - 985724 on Build GRCh38 Insertion LOC100130417 PLEKHN1 LOC284600 KLHL17 NOC2L PERM1 SAMD11 LOC107985728
nsv428334 Chr.1:874371 - 1220569 on Build GRCh38 Gain ISG15 KLHL17 LOC100288175 AGRN PERM1 TNFRSF18 SDF4 TTLL10 NOC2L SAMD11 C1orf159 LOC107985728 LOC105378948 PLEKHN1 TTLL10-AS1 LOC284600 HES4 RNF223 LINC01342 MIR200B LOC100130417 MIR429 TNFRSF4 FAM41C MIR200A
dgv5n100 Chr.1:585989 - 1114424 on Build GRCh38 Gain MTND1P23 ISG15 KLHL17 LINC01128 LOC100287934 LOC100288175 AGRN PERM1 LOC105378947 NOC2L MTND2P28 SAMD11 LOC101928626 C1orf159 OR4F16 LOC107985728 LOC105378948 PLEKHN1 LOC284600 HES4 RNF223 LOC100133331 LINC00115 LOC100130417 LOC100288069 LOC107984841 FAM87B FAM41C MIR6723
nsv10161 Chr.1:776731 - 1777210 on Build GRCh38 Gain+Loss DVL1 LINC01128 MIR6727 LOC100287934 AGRN PERM1 MMP23B TNFRSF18 TMEM240 ATAD3C FAM132A CDK11A ATAD3A NOC2L CPSF3L PLEKHN1 FNDC10 ACAP3 PUSL1 LOC284600 HES4 AURKAIP1 RNF223 CDK11B MIR200B MIB2 MIR429 TNFRSF4 MIR6808 MIR200A SLC35E2 ISG15 KLHL17 TAS1R3 LOC100288175 TMEM88B ATAD3B B3GALT6 UBE2J2 SDF4 SSU72 ANKRD65 TTLL10 MIR6726 SAMD11 SLC35E2B C1orf159 NADK LOC107985728 LOC105378948 TTLL10-AS1 CCNL2 MRPL20 LINC01342 CPTP LOC148413 LINC00115 LOC100130417 LOC100288069 FAM87B LOC102724312 SCNN1D LOC107985729 MMP23A FAM41C VWA1 MXRA8
nsv517709 Chr.1:817186 - 1275912 on Build GRCh38 Gain+Loss ISG15 KLHL17 LINC01128 LOC100288175 AGRN PERM1 TNFRSF18 B3GALT6 UBE2J2 SDF4 TTLL10 FAM132A NOC2L SAMD11 C1orf159 LOC107985728 LOC105378948 PLEKHN1 TTLL10-AS1 LOC284600 HES4 RNF223 LINC01342 MIR200B LINC00115 LOC100130417 MIR429 FAM87B TNFRSF4 FAM41C MIR200A
nsv1013524 Chr.1:939510 - 1161955 on Build GRCh38 Gain LOC105378948 PLEKHN1 ISG15 KLHL17 HES4 LOC100288175 RNF223 AGRN PERM1 LINC01342 NOC2L SAMD11 C1orf159
dgv2n67 Chr.1:877618 - 1426500 on Build GRCh38 Gain DVL1 ISG15 KLHL17 MIR6727 TAS1R3 LOC100288175 TMEM88B AGRN PERM1 TNFRSF18 B3GALT6 UBE2J2 SDF4 ANKRD65 TTLL10 FAM132A NOC2L MIR6726 CPSF3L SAMD11 C1orf159 LOC107985728 LOC105378948 PLEKHN1 TTLL10-AS1 ACAP3 PUSL1 LOC284600 HES4 CCNL2 AURKAIP1 MRPL20 RNF223 LINC01342 CPTP LOC148413 MIR200B LOC100130417 MIR429 SCNN1D TNFRSF4 MIR6808 MIR200A MXRA8
nsv544895 Chr.1:917392 - 1054900 on Build GRCh38 Loss LOC100130417 PLEKHN1 ISG15 LOC284600 KLHL17 HES4 NOC2L AGRN PERM1 SAMD11 LOC107985728
nsv1160644 Chr.1:939652 - 1220663 on Build GRCh38 Deletion LOC105378948 PLEKHN1 TTLL10-AS1 ISG15 KLHL17 HES4 LOC100288175 RNF223 AGRN PERM1 TNFRSF18 LINC01342 MIR200B SDF4 MIR429 TNFRSF4 TTLL10 MIR200A NOC2L SAMD11 C1orf159
nsv832980 Chr.1:848279 - 1007037 on Build GRCh38 Gain LOC100130417 PLEKHN1 LOC284600 KLHL17 LINC01128 HES4 FAM41C NOC2L PERM1 SAMD11 LOC107985728

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More Information


Set Membership:

 Intragenic Non-exonic DGV Variation

Gene Ontology Categories:

Process(es)


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