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See other CDHR5 CNV Assays ›
Gene Symbol
CDHR5
Assay Reference Genome
Location

Chr.11:616799 on build GRCh38
Cytoband
11p15.5
Assay ID Hs02202347_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 53841

Gene Name:

 cadherin related family member 5

Gene Aliases:

 MLPCDH, MU-PCDH, MUCDHL, MUPCDH

Location:

 Chr.11:616565-625067 on Build GRCh38

Assay Gene Location:

 Within Exon 15
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
CDHR5 NM_001171968.1 15 3237 NP_001165439.1
NM_021924.4 15 3255 NP_068743.2
NM_031264.3 14 2673 NP_112554.2
XM_006718253.3 15 2915 XP_006718316.1
XM_011520188.2 15 2822 XP_011518490.1
XM_011520189.2 15 2729 XP_011518491.1
XM_011520190.2 13 2488 XP_011518492.1
AF258675.1 13 1824 AAG16732.1
AW137262.1 1 236
AY358368.1 15 3094 AAQ88734.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv951270 Chr.11:528401 - 628100 on Build GRCh38 Deletion LRRC56 LOC143666 MIR210 CDHR5 LOC101059906 RASSF7 MIR210HG LMNTD2 SCT PHRF1 HRAS IRF7
nsv552861 Chr.11:589246 - 662407 on Build GRCh38 Loss DRD4 CDHR5 DEAF1 SCT PHRF1 IRF7
esv2759794 Chr.11:409846 - 1336162 on Build GRCh38 Loss LOC143666 RNH1 MUC2 DRD4 EPS8L2 RASSF7 PDDC1 TSPAN4 PHRF1 SLC25A22 TALDO1 PIDD1 MIR6744 CDHR5 CHID1 LOC101059906 TOLLIP-AS1 POLR2L LMNTD2 MUC5B HRAS AP2A2 LOC101927503 MUC5AC IRF7 LRRC56 TOLLIP PNPLA2 RPLP2 MIR210HG SCT MUC6 PANO1 CEND1 CRACR2B TMEM80 MIR210 LOC171391 SIGIRR DEAF1 SNORA52 CD151 ANO9 PTDSS2
nsv1039558 Chr.11:534242 - 672091 on Build GRCh38 Gain LRRC56 LOC143666 DRD4 RASSF7 MIR210HG SCT PHRF1 MIR210 CDHR5 DEAF1 LMNTD2 HRAS IRF7
nsv1053964 Chr.11:491334 - 692433 on Build GRCh38 Gain LRRC56 LOC143666 RNH1 DRD4 RASSF7 MIR210HG SCT PHRF1 MIR210 CDHR5 LOC101059906 DEAF1 LMNTD2 HRAS PTDSS2 IRF7
dgv182e199 Chr.11:349830 - 943372 on Build GRCh38 Deletion LOC143666 RNH1 DRD4 EPS8L2 RASSF7 PDDC1 TSPAN4 PHRF1 SLC25A22 PKP3 TALDO1 PIDD1 CDHR5 CHID1 LOC101059906 POLR2L LMNTD2 HRAS AP2A2 IRF7 LRRC56 PNPLA2 RPLP2 MIR210HG SCT PANO1 CEND1 CRACR2B TMEM80 MIR210 LOC171391 SIGIRR B4GALNT4 DEAF1 SNORA52 CD151 ANO9 PTDSS2
nsv1159791 Chr.11:461793 - 909492 on Build GRCh38 Deletion LOC143666 RNH1 DRD4 EPS8L2 RASSF7 PDDC1 TSPAN4 PHRF1 SLC25A22 TALDO1 PIDD1 CDHR5 CHID1 LOC101059906 POLR2L LMNTD2 HRAS IRF7 LRRC56 PNPLA2 RPLP2 MIR210HG SCT PANO1 CEND1 CRACR2B TMEM80 MIR210 LOC171391 DEAF1 SNORA52 CD151 PTDSS2
dgv1524n54 Chr.11:610277 - 619789 on Build GRCh38 Loss CDHR5 PHRF1 IRF7
nsv552856 Chr.11:549119 - 619789 on Build GRCh38 Gain LRRC56 LOC143666 MIR210 CDHR5 RASSF7 MIR210HG LMNTD2 PHRF1 IRF7
nsv552865 Chr.11:612843 - 626730 on Build GRCh38 Loss CDHR5 SCT IRF7
dgv1522n54 Chr.11:557342 - 656845 on Build GRCh38 Loss LOC143666 DRD4 MIR210 CDHR5 DEAF1 RASSF7 MIR210HG LMNTD2 SCT PHRF1 IRF7
nsv467634 Chr.11:511805 - 619789 on Build GRCh38 Loss LRRC56 LOC143666 MIR210 CDHR5 LOC101059906 RASSF7 MIR210HG LMNTD2 PHRF1 HRAS IRF7
nsv527327 Chr.11:295343 - 620599 on Build GRCh38 Loss LRRC56 IFITM2 LOC143666 RNH1 IFITM3 RASSF7 MIR210HG PGGHG PHRF1 PKP3 MIR210 CDHR5 SIGIRR LOC101059906 IFITM5 B4GALNT4 IFITM1 LMNTD2 HRAS ANO9 PTDSS2 IRF7
nsv469923 Chr.11:378188 - 1302334 on Build GRCh38 Loss LOC143666 RNH1 MUC2 DRD4 EPS8L2 RASSF7 PDDC1 TSPAN4 PHRF1 SLC25A22 PKP3 TALDO1 PIDD1 MIR6744 CDHR5 CHID1 LOC101059906 POLR2L LMNTD2 MUC5B HRAS AP2A2 LOC101927503 MUC5AC IRF7 LRRC56 TOLLIP PNPLA2 RPLP2 MIR210HG SCT MUC6 PANO1 CEND1 CRACR2B TMEM80 MIR210 LOC171391 SIGIRR B4GALNT4 DEAF1 SNORA52 CD151 ANO9 PTDSS2
nsv552862 Chr.11:605856 - 619789 on Build GRCh38 Loss CDHR5 PHRF1 IRF7
esv2762889 Chr.11:606294 - 653614 on Build GRCh38 Loss DRD4 CDHR5 DEAF1 SCT PHRF1 IRF7
nsv528415 Chr.11:558884 - 620599 on Build GRCh38 Loss LOC143666 MIR210 CDHR5 RASSF7 MIR210HG LMNTD2 PHRF1 IRF7

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