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See other CDHR5 CNV Assays ›
Gene Symbol
CDHR5
Assay Reference Genome
Location

Chr.11:616799 on build GRCh38
Cytoband
11p15.5
Assay ID Hs02202347_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 53841

Gene Name:

 cadherin related family member 5

Gene Aliases:

 MLPCDH, MU-PCDH, MUCDHL, MUPCDH

Location:

 Chr.11:616565-625067 on Build GRCh38

Assay Gene Location:

 Within Exon 15
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
CDHR5 NM_001171968.1 15 3237 NP_001165439.1
NM_021924.4 15 3255 NP_068743.2
NM_031264.3 14 2673 NP_112554.2
XM_006718253.3 15 2915 XP_006718316.1
XM_011520188.2 15 2822 XP_011518490.1
XM_011520189.2 15 2729 XP_011518491.1
XM_011520190.2 13 2488 XP_011518492.1
AF258675.1 13 1824 AAG16732.1
AW137262.1 1 236
AY358368.1 15 3094 AAQ88734.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv951270 Chr.11:528401 - 628100 on Build GRCh38 Deletion IRF7 LMNTD2 LRRC56 LOC101059906 HRAS PHRF1 RASSF7 LOC143666 MIR210 MIR210HG SCT CDHR5
nsv552861 Chr.11:589246 - 662407 on Build GRCh38 Loss IRF7 DEAF1 PHRF1 DRD4 SCT CDHR5
esv2759794 Chr.11:409846 - 1336162 on Build GRCh38 Loss AP2A2 MUC5B SIGIRR LOC101059906 MUC2 TSPAN4 MIR6744 PANO1 EPS8L2 SLC25A22 MUC6 MIR210 PDDC1 POLR2L CDHR5 ANO9 CD151 MUC5AC LMNTD2 TMEM80 LRRC56 TOLLIP TOLLIP-AS1 RNH1 RASSF7 LOC171391 IRF7 PIDD1 DEAF1 CHID1 CEND1 RPLP2 HRAS PHRF1 MIR210HG SCT LOC101927503 CRACR2B TALDO1 PTDSS2 LOC143666 PNPLA2 DRD4 SNORA52
nsv1039558 Chr.11:534242 - 672091 on Build GRCh38 Gain IRF7 DEAF1 HRAS PHRF1 MIR210 MIR210HG SCT CDHR5 LMNTD2 LRRC56 RASSF7 LOC143666 DRD4
dgv182e199 Chr.11:349830 - 943372 on Build GRCh38 Deletion AP2A2 SIGIRR LOC101059906 TSPAN4 PKP3 PANO1 EPS8L2 SLC25A22 MIR210 PDDC1 POLR2L CDHR5 ANO9 CD151 LMNTD2 TMEM80 B4GALNT4 LRRC56 RNH1 RASSF7 LOC171391 IRF7 PIDD1 DEAF1 CHID1 CEND1 RPLP2 HRAS PHRF1 MIR210HG SCT CRACR2B TALDO1 PTDSS2 LOC143666 PNPLA2 DRD4 SNORA52
nsv1053964 Chr.11:491334 - 692433 on Build GRCh38 Gain IRF7 DEAF1 LOC101059906 HRAS PHRF1 MIR210 MIR210HG SCT CDHR5 LMNTD2 LRRC56 PTDSS2 RNH1 RASSF7 LOC143666 DRD4
dgv1524n54 Chr.11:610277 - 619789 on Build GRCh38 Loss IRF7 PHRF1 CDHR5
nsv1159791 Chr.11:461793 - 909492 on Build GRCh38 Deletion LOC101059906 TSPAN4 PANO1 EPS8L2 SLC25A22 MIR210 PDDC1 POLR2L CDHR5 CD151 LMNTD2 TMEM80 LRRC56 RNH1 RASSF7 LOC171391 IRF7 PIDD1 DEAF1 CHID1 CEND1 RPLP2 HRAS PHRF1 MIR210HG SCT CRACR2B TALDO1 PTDSS2 LOC143666 PNPLA2 DRD4 SNORA52
nsv552856 Chr.11:549119 - 619789 on Build GRCh38 Gain IRF7 LMNTD2 LRRC56 PHRF1 RASSF7 LOC143666 MIR210 MIR210HG CDHR5
nsv552854 Chr.11:511805 - 619789 on Build GRCh38 Loss IRF7 LMNTD2 LRRC56 LOC101059906 HRAS PHRF1 RASSF7 LOC143666 MIR210 MIR210HG CDHR5
dgv1523n54 Chr.11:557342 - 656940 on Build GRCh38 Gain IRF7 DEAF1 LMNTD2 PHRF1 RASSF7 LOC143666 DRD4 MIR210 MIR210HG SCT CDHR5
nsv552865 Chr.11:612843 - 626730 on Build GRCh38 Loss IRF7 SCT CDHR5
nsv527327 Chr.11:295343 - 620599 on Build GRCh38 Loss IRF7 SIGIRR LOC101059906 HRAS PHRF1 IFITM3 PKP3 MIR210 MIR210HG CDHR5 ANO9 IFITM2 PGGHG LMNTD2 B4GALNT4 LRRC56 IFITM1 PTDSS2 RNH1 RASSF7 LOC143666 IFITM5
nsv469923 Chr.11:378188 - 1302334 on Build GRCh38 Loss AP2A2 MUC5B SIGIRR LOC101059906 MUC2 TSPAN4 MIR6744 PKP3 PANO1 EPS8L2 SLC25A22 MUC6 MIR210 PDDC1 POLR2L CDHR5 ANO9 CD151 MUC5AC LMNTD2 TMEM80 B4GALNT4 LRRC56 TOLLIP RNH1 RASSF7 LOC171391 IRF7 PIDD1 DEAF1 CHID1 CEND1 RPLP2 HRAS PHRF1 MIR210HG SCT LOC101927503 CRACR2B TALDO1 PTDSS2 LOC143666 PNPLA2 DRD4 SNORA52
nsv552862 Chr.11:605856 - 619789 on Build GRCh38 Loss IRF7 PHRF1 CDHR5
esv2762889 Chr.11:606294 - 653614 on Build GRCh38 Loss IRF7 DEAF1 PHRF1 DRD4 SCT CDHR5
nsv528415 Chr.11:558884 - 620599 on Build GRCh38 Loss IRF7 LMNTD2 PHRF1 RASSF7 LOC143666 MIR210 MIR210HG CDHR5

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