Genomic Map
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Target Gene Details
Entrez Gene ID: | 26512 |
Gene Name: | integrator complex subunit 6 |
Gene Aliases: |
DBI-1, DDX26, DDX26A, DICE1, HDB, INT6, Notchl2 |
Location: |
Chr.13:51353171-51453236 on Build GRCh38 |
Assay Gene Location: | Within Exon 20 |
| Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
|---|---|---|---|---|
| INTS6 | NM_001039937.1 | 19 | 6115 | NP_001035026.1 |
| NM_001306091.1 | 20 | 6891 | NP_001293020.1 | |
| NM_012141.2 | 18 | 6607 | NP_036273.1 | |
| XM_011535040.2 | XP_011533342.1 | |||
| AA262171.1 | 1 | 372 | ||
| BX116410.1 | 1 | 53 |
Target Gene Details
Entrez Gene ID: | 647174 |
Gene Name: | serpin family E member 3 |
Gene Aliases: |
- |
Location: |
Chr.13:51334976-51362391 on Build GRCh38 |
Assay Gene Location: | Overlaps - Exon 6 |
| Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
|---|---|---|---|---|
| SERPINE3 | XM_017020707.1 | XP_016876196.1 | ||
| AM402969.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
| Target Variation |
Location | CNV Subtype |
Genes |
|---|---|---|---|
| nsv832611 | Chr.13:51192336 - 51364178 on Build GRCh38 | Loss |
 MIR5693
SERPINE3
INTS6
FAM124A
|
| nsv561618 | Chr.13:49907577 - 51521449 on Build GRCh38 | Loss |
MIR5693
MIR16-1
MIR15A
DLEU2
DLEU1
MIR3613
INTS6
FAM124A
RNASEH2B
KCNRG
SPRYD7
ST13P4
GUCY1B2
DLEU7-AS1
INTS6-AS1
LINC00371
RNASEH2B-AS1
DLEU1-AS1
SERPINE3
DLEU7
TRIM13
|
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Additional Information:
For this assay, SNP(s) [rs112585939] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.
Set Membership: |
Intragenic
Exonic
Non-exonic
DGV Variation
|
Panther Classification:
Gene Ontology Categories:
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