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See other NAGPA CNV Assays ›
Gene Symbol
NAGPA
Assay Reference Genome
Location

Chr.16:5031751 on build GRCh38
Cytoband
16p13.3
Assay ID Hs02248545_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 51172

Gene Name:

 N-acetylglucosamine-1-phosphodiester alpha-N-acetylglucosaminidase

Gene Aliases:

 APAA, UCE

Location:

 Chr.16:5024844-5033941 on Build GRCh38

Assay Gene Location:

 Overlaps Intron 3 - Exon 3
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
NAGPA NM_016256.3 NP_057340.2
XM_011522517.2 XP_011520819.1
AF187072.1 AAF08273.1
AK025570.1
AK026122.1
AK127952.1
AK302916.1 3 635
AK314320.1
BC012194.1 AAH12194.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv1722 Chr.16:5031097 - 5075947 on Build GRCh38 Deletion ALG1 NAGPA-AS1 C16orf89 NAGPA
nsv1042612 Chr.16:4965694 - 5150514 on Build GRCh38 Loss ALG1 EEF2KMT NAGPA-AS1 C16orf89 NAGPA SEC14L5
esv3892762 Chr.16:4967386 - 5060625 on Build GRCh38 Gain NAGPA-AS1 C16orf89 NAGPA SEC14L5
nsv428318 Chr.16:5011594 - 5374828 on Build GRCh38 Gain ALG1 RBFOX1 EEF2KMT NAGPA-AS1 C16orf89 NAGPA SEC14L5
esv25186 Chr.16:4858500 - 5142800 on Build GRCh38 Gain ALG1 PPL EEF2KMT NAGPA-AS1 UBN1 C16orf89 NAGPA SEC14L5
esv3637713 Chr.16:4957958 - 5307305 on Build GRCh38 Gain ALG1 RBFOX1 EEF2KMT NAGPA-AS1 C16orf89 NAGPA SEC14L5
esv3637714 Chr.16:4958035 - 5079276 on Build GRCh38 Gain ALG1 NAGPA-AS1 C16orf89 NAGPA SEC14L5
esv2422516 Chr.16:4775920 - 5160979 on Build GRCh38 Deletion ALG1 GLYR1 PPL EEF2KMT NAGPA-AS1 UBN1 C16orf89 SMIM22 NAGPA SEC14L5 ROGDI SEPT12
nsv1046986 Chr.16:4049000 - 5555721 on Build GRCh38 Gain ANKS3 EEF2KMT ADCY9 VASN SEC14L5 SRL ZNF500 NMRAL1 LOC105371063 NUDT16L1 PPL NAGPA-AS1 GLIS2 C16orf96 UBN1 SMIM22 GLIS2-AS1 MGRN1 PAM16 ROGDI UBALD1 C16orf71 HMOX2 ALG1 RBFOX1 GLYR1 LINC01569 NAGPA CORO7-PAM16 TFAP4 CORO7 MIR6769A CDIP1 C16orf89 DNAJA3 SEPT12
esv34300 Chr.16:5005938 - 5322534 on Build GRCh38 Gain ALG1 RBFOX1 EEF2KMT NAGPA-AS1 C16orf89 NAGPA SEC14L5
nsv1038475 Chr.16:5004985 - 5310633 on Build GRCh38 Gain ALG1 RBFOX1 EEF2KMT NAGPA-AS1 C16orf89 NAGPA SEC14L5
esv2760069 Chr.16:4922849 - 5374828 on Build GRCh38 Gain+Loss ALG1 RBFOX1 PPL EEF2KMT NAGPA-AS1 C16orf89 NAGPA SEC14L5
nsv571303 Chr.16:4960912 - 5284683 on Build GRCh38 Loss ALG1 RBFOX1 EEF2KMT NAGPA-AS1 C16orf89 NAGPA SEC14L5
nsv817715 Chr.16:5006294 - 5309352 on Build GRCh38 Gain ALG1 RBFOX1 EEF2KMT NAGPA-AS1 C16orf89 NAGPA SEC14L5
nsv1039432 Chr.16:5013335 - 5074451 on Build GRCh38 Loss ALG1 NAGPA-AS1 C16orf89 NAGPA SEC14L5

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