Hs02248837_cn

• Gene Symbol: MEGF6
• Assay Reference Genome Location: Chr.1:3499260 on build GRCh38
• Cytoband: 1p36.32

Target Gene Details

• Entrez Gene ID: 1953
• Gene Name: multiple EGF like domains 6
• Gene Aliases: EGFL3
• Location: Chr.1:3487942-3624757 on Build GRCh38
• Assay Gene Location: Overlaps Intron 26 - Exon 27

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
MEGF6	NM_001409.3			NP_001400.3
	XM_006710406.3			XP_006710469.1
	XM_011540885.1			XP_011539187.1
	XM_011540886.1			XP_011539188.1
	XM_011540887.2			XP_011539189.1
	XM_011540888.2			XP_011539190.1
	XM_017000533.1			XP_016856022.1
	AB011539.2			BAA32467.2
	AB231860.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
esv2758915	Chr.1:3372374 - 3632289 on Build GRCh38	Gain	ARHGEF16 TPRG1L MIR551A PRDM16 WRAP73 MEGF6
nsv470687	Chr.1:3356499 - 3763210 on Build GRCh38	Loss	ARHGEF16 CCDC27 TP73-AS1 TPRG1L MIR551A TP73 PRDM16 WRAP73 MEGF6
nsv1012423	Chr.1:3477686 - 4747449 on Build GRCh38	Gain	LRRC47 CEP104 MIR551A LINC01346 TP73 LINC01134 C1orf174 AJAP1 SMIM1 LOC284661 MEGF6 ARHGEF16 CCDC27 TP73-AS1 TPRG1L DFFB WRAP73
nsv951959	Chr.1:3051037 - 3812036 on Build GRCh38	Deletion	LRRC47 LINC00982 MIR551A TP73 PRDM16 SMIM1 MEGF6 MIR4251 ARHGEF16 CCDC27 TP73-AS1 TPRG1L LOC105378604 WRAP73
esv3893545	Chr.1:3460878 - 3512044 on Build GRCh38	Loss	ARHGEF16 MEGF6
nsv545125	Chr.1:3490443 - 3540731 on Build GRCh38	Loss	MEGF6
nsv830203	Chr.1:3446374 - 3607752 on Build GRCh38	Loss	ARHGEF16 MIR551A MEGF6
nsv299	Chr.1:3476928 - 3512705 on Build GRCh38	Insertion	ARHGEF16 MEGF6

More Information

• Set Membership: Intragenic, Non-exonic, DGV Variation

Panther Classification:

Molecular Function -

extracellular matrix protein

Gene Ontology Categories:

Process(es)

biological_process

Function(s)

calcium ion binding
protein binding