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Gene Symbol
PUSL1
Assay Reference Genome
Location

Chr.1:1310662 on build GRCh38
Cytoband
1p36.33
Assay ID Hs02263042_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 126789

Gene Name:

 pseudouridylate synthase-like 1

Gene Aliases:

 -

Location:

 Chr.1:1308562-1311677 on Build GRCh38

Assay Gene Location:

 Overlaps Intron 5 - Intron 6
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
PUSL1 NM_153339.1 NP_699170.1
XM_005244720.3 XP_005244777.1
AK027721.1 3 1328
AK075292.1 BAC11527.1
AK298218.1
BC034304.1 AAH34304.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv482937 Chr.1:10001 - 2368561 on Build GRCh38 Loss ISG15 LOC100506504 LOC100130417 VWA1 MIR6808 SCNN1D LOC105378591 MIR6727 LOC105378947 CDK11B MIR429 MIR200B ACAP3 OR4F16 NOC2L CDK11A LOC729737 MRPL20 PLEKHN1 CFAP74 ANKRD65 TTLL10 LOC105378589 LINC01342 LOC107984841 LINC00115 SDF4 LOC102725121 CCNL2 PUSL1 MIR6859-1 FAM138A LOC105378948 GNB1 SAMD11 UBE2J2 ATAD3C LOC107985729 FAM87B LOC100287934 TNFRSF18 DVL1 LINC01128 WASH7P SLC35E2B SLC35E2 FAM132A MTND2P28 TNFRSF4 PERM1 LOC100129534 LOC284600 MIR200A CPTP MIR6726 AGRN KLHL17 B3GALT6 AURKAIP1 MIB2 TTLL10-AS1 LOC105378592 LOC148413 OR4F5 MORN1 LOC105378949 PRKCZ MMP23A C1orf159 TMEM88B SKI LOC102724312 MIR1302-2 TMEM52 OR4F29 DDX11L1 LOC107985728 FNDC10 LOC100288069 TMEM240 MMP23B ATAD3A FAM41C CALML6 GABRD MIR6859-2 MTND1P23 HES4 NADK MIR6723 FAAP20 MXRA8 ATAD3B LOC101928626 LOC100132287 SSU72 CPSF3L LOC100288175 LOC100134822 TAS1R3 RNF223 LOC100133331
nsv544971 Chr.1:1294063 - 1351426 on Build GRCh38 Loss MIR6726 MIR6727 CPSF3L ACAP3 PUSL1 DVL1 TAS1R3 MIR6808 CPTP
nsv544969 Chr.1:1290683 - 1374597 on Build GRCh38 Loss MIR6726 MIR6727 CPSF3L ACAP3 PUSL1 DVL1 AURKAIP1 MXRA8 TAS1R3 MIR6808 SCNN1D CPTP
dgv7n100 Chr.1:1306835 - 1379057 on Build GRCh38 Loss MIR6727 CPSF3L ACAP3 PUSL1 DVL1 AURKAIP1 MXRA8 TAS1R3 MIR6808 CPTP
nsv470680 Chr.1:1070426 - 1378635 on Build GRCh38 Loss TNFRSF18 DVL1 TTLL10 FAM132A LINC01342 TNFRSF4 MIR200A SDF4 MIR6808 SCNN1D CPTP MIR6726 MIR6727 B3GALT6 PUSL1 AURKAIP1 TTLL10-AS1 MXRA8 MIR429 MIR200B CPSF3L ACAP3 UBE2J2 C1orf159 TAS1R3 RNF223
dgv6n100 Chr.1:1301750 - 1362354 on Build GRCh38 Gain+Loss MIR6727 CPSF3L ACAP3 PUSL1 DVL1 MXRA8 TAS1R3 MIR6808 CPTP
nsv1160772 Chr.1:1027585 - 1333467 on Build GRCh38 Duplication TNFRSF18 TTLL10 FAM132A LINC01342 TNFRSF4 MIR200A SDF4 SCNN1D CPTP MIR6726 MIR6727 AGRN B3GALT6 PUSL1 TTLL10-AS1 LOC105378948 MIR429 MIR200B CPSF3L ACAP3 LOC100288175 UBE2J2 C1orf159 TAS1R3 RNF223
nsv1160788 Chr.1:1282706 - 1376336 on Build GRCh38 Deletion MIR6726 MIR6727 CPSF3L ACAP3 PUSL1 DVL1 AURKAIP1 MXRA8 TAS1R3 MIR6808 SCNN1D CPTP
nsv10161 Chr.1:776731 - 1777210 on Build GRCh38 Gain+Loss FAM87B LOC100287934 TNFRSF18 DVL1 LINC01128 ISG15 SLC35E2B SLC35E2 FAM132A TNFRSF4 PERM1 LOC100130417 VWA1 LOC284600 MIR200A MIR6808 SCNN1D CPTP MIR6726 MIR6727 AGRN KLHL17 B3GALT6 AURKAIP1 MIB2 TTLL10-AS1 CDK11B LOC148413 MIR429 MIR200B ACAP3 MMP23A NOC2L C1orf159 CDK11A TMEM88B LOC102724312 MRPL20 PLEKHN1 LOC107985728 ANKRD65 TTLL10 FNDC10 LOC100288069 LINC01342 TMEM240 MMP23B ATAD3A FAM41C LINC00115 SDF4 HES4 NADK CCNL2 PUSL1 MXRA8 LOC105378948 ATAD3B SAMD11 SSU72 CPSF3L LOC100288175 UBE2J2 ATAD3C TAS1R3 RNF223 LOC107985729
esv3890636 Chr.1:1304555 - 1353203 on Build GRCh38 Loss MIR6727 CPSF3L ACAP3 PUSL1 DVL1 MXRA8 TAS1R3 MIR6808 CPTP
nsv950452 Chr.1:1106921 - 1637538 on Build GRCh38 Deletion LOC102724312 TNFRSF18 MRPL20 DVL1 ANKRD65 TTLL10 FAM132A FNDC10 LINC01342 TNFRSF4 TMEM240 MMP23B ATAD3A VWA1 MIR200A SDF4 MIR6808 SCNN1D CPTP MIR6726 MIR6727 CCNL2 B3GALT6 PUSL1 AURKAIP1 MIB2 TTLL10-AS1 MXRA8 ATAD3B CDK11B LOC148413 MIR429 MIR200B SSU72 CPSF3L ACAP3 UBE2J2 C1orf159 ATAD3C TAS1R3 TMEM88B LOC107985729
nsv1000169 Chr.1:1281678 - 1362354 on Build GRCh38 Gain MIR6726 MIR6727 CPSF3L ACAP3 PUSL1 DVL1 MXRA8 TAS1R3 MIR6808 SCNN1D CPTP
esv2758912 Chr.1:1263940 - 1384492 on Build GRCh38 Loss MIR6726 MIR6727 PUSL1 DVL1 AURKAIP1 MXRA8 CPSF3L ACAP3 UBE2J2 TAS1R3 MIR6808 SCNN1D CPTP
dgv2n67 Chr.1:877618 - 1426500 on Build GRCh38 Gain TNFRSF18 MRPL20 DVL1 PLEKHN1 LOC107985728 ISG15 ANKRD65 TTLL10 FAM132A LINC01342 TNFRSF4 PERM1 LOC100130417 LOC284600 MIR200A SDF4 MIR6808 SCNN1D CPTP MIR6726 MIR6727 HES4 AGRN KLHL17 CCNL2 B3GALT6 PUSL1 AURKAIP1 TTLL10-AS1 MXRA8 LOC105378948 SAMD11 LOC148413 MIR429 MIR200B CPSF3L ACAP3 LOC100288175 UBE2J2 NOC2L C1orf159 TAS1R3 RNF223 TMEM88B
nsv469848 Chr.1:1146082 - 1322235 on Build GRCh38 Gain MIR6726 MIR6727 TNFRSF18 B3GALT6 PUSL1 TTLL10-AS1 TTLL10 FAM132A MIR429 TNFRSF4 MIR200B CPSF3L ACAP3 MIR200A UBE2J2 SDF4 SCNN1D

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More Information


Set Membership:

 Intragenic Intronic Non-exonic DGV Variation

Panther Classification:

Molecular Function -

lyase

Gene Ontology Categories:

Function(s) Process(es)


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