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See other ACAP3 CNV Assays ›
Gene Symbol
ACAP3
Assay Reference Genome
Location

Chr.1:1298368 on build GRCh38
Cytoband
1p36.33
Assay ID Hs02269237_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 116983

Gene Name:

 ArfGAP with coiled-coil, ankyrin repeat and PH domains 3

Gene Aliases:

 CENTB5

Location:

 Chr.1:1292384-1307925 on Build GRCh38

Assay Gene Location:

 Overlaps Intron 12 - Intron 13
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
ACAP3 NM_030649.2 NP_085152.2
XM_005244715.2 XP_005244772.1
XM_011540606.2 XP_011538908.1
XM_011540607.1 XP_011538909.1
XM_011540608.2 XP_011538910.1
XM_011540609.2 XP_011538911.1
XM_017000233.1 XP_016855722.1
AB051503.1 BAB21807.1
AF411981.1 AAL04165.1
AK093954.1 BAC04257.1
BC051194.1 AAH51194.2

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv817616 Chr.1:1257135 - 1306704 on Build GRCh38 Loss ACAP3 SCNN1D MIR6726 UBE2J2
nsv482937 Chr.1:10001 - 2368561 on Build GRCh38 Loss OR4F29 VWA1 HES4 LOC100133331 MIR6726 GABRD MRPL20 WASH7P LOC729737 LOC107985728 AURKAIP1 LOC100287934 CCNL2 LOC105378589 CFAP74 MIR6859-1 CDK11A LOC100288069 FAM132A MTND1P23 LOC105378949 TTLL10 LOC105378591 LOC107984841 LOC100130417 ISG15 CDK11B UBE2J2 TMEM52 LOC100134822 PRKCZ LOC101928626 LOC100288175 DVL1 SKI NOC2L C1orf159 LINC00115 MMP23B MORN1 CPTP DDX11L1 SDF4 MMP23A FNDC10 LOC105378947 PUSL1 OR4F5 ACAP3 LOC100129534 OR4F16 TTLL10-AS1 TNFRSF18 LINC01342 FAM41C SAMD11 FAM138A LOC100132287 LOC107985729 TMEM88B TNFRSF4 SLC35E2 MIR6727 MIR6859-2 TMEM240 MIR200B MIR6808 GNB1 LINC01128 ANKRD65 LOC284600 LOC148413 FAAP20 SSU72 ATAD3A ATAD3B SCNN1D KLHL17 RNF223 LOC105378592 TAS1R3 NADK AGRN MXRA8 LOC105378948 PLEKHN1 SLC35E2B FAM87B MIR429 ATAD3C CALML6 MIB2 MIR6723 CPSF3L MIR200A PERM1 LOC100506504 LOC102725121 MIR1302-2 B3GALT6 LOC102724312 MTND2P28
nsv544965 Chr.1:1217251 - 1306704 on Build GRCh38 Loss FAM132A ACAP3 SCNN1D SDF4 B3GALT6 MIR6726 UBE2J2
nsv544971 Chr.1:1294063 - 1351426 on Build GRCh38 Loss CPTP TAS1R3 ACAP3 DVL1 MIR6808 CPSF3L MIR6726 PUSL1 MIR6727
dgv25n54 Chr.1:1290683 - 1306366 on Build GRCh38 Loss ACAP3 SCNN1D MIR6726
nsv544947 Chr.1:1070426 - 1306704 on Build GRCh38 Loss FAM132A TTLL10 SDF4 MIR200A MIR6726 UBE2J2 TNFRSF4 ACAP3 MIR200B SCNN1D B3GALT6 RNF223 TTLL10-AS1 C1orf159 TNFRSF18 MIR429 LINC01342
nsv1160772 Chr.1:1027585 - 1333467 on Build GRCh38 Duplication FAM132A TAS1R3 TTLL10 MIR6726 UBE2J2 AGRN TNFRSF4 MIR6727 LOC100288175 LOC105378948 MIR200B C1orf159 MIR429 CPTP SDF4 CPSF3L MIR200A PUSL1 ACAP3 SCNN1D B3GALT6 RNF223 TTLL10-AS1 TNFRSF18 LINC01342
nsv1160788 Chr.1:1282706 - 1376336 on Build GRCh38 Deletion CPTP TAS1R3 ACAP3 DVL1 MIR6808 SCNN1D AURKAIP1 CPSF3L MIR6726 PUSL1 MXRA8 MIR6727
nsv10161 Chr.1:776731 - 1777210 on Build GRCh38 Gain+Loss VWA1 SAMD11 HES4 MIR6726 LOC107985729 MRPL20 TMEM88B TNFRSF4 SLC35E2 MIR6727 TMEM240 MIR200B MIR6808 LINC01128 LOC107985728 AURKAIP1 LOC100287934 CCNL2 ANKRD65 LOC284600 LOC148413 SSU72 ATAD3A ATAD3B SCNN1D KLHL17 CDK11A LOC100288069 RNF223 FAM132A TAS1R3 TTLL10 NADK LOC100130417 ISG15 CDK11B UBE2J2 AGRN MXRA8 LOC100288175 LOC105378948 PLEKHN1 DVL1 SLC35E2B FAM87B NOC2L C1orf159 LINC00115 MMP23B MIR429 ATAD3C CPTP SDF4 MIB2 MMP23A CPSF3L MIR200A FNDC10 PERM1 PUSL1 ACAP3 B3GALT6 TTLL10-AS1 TNFRSF18 LINC01342 LOC102724312 FAM41C
nsv950452 Chr.1:1106921 - 1637538 on Build GRCh38 Deletion FAM132A TAS1R3 VWA1 TTLL10 MIR6726 LOC107985729 CDK11B MRPL20 UBE2J2 TMEM88B TNFRSF4 MXRA8 MIR6727 TMEM240 MIR200B DVL1 MIR6808 AURKAIP1 C1orf159 CCNL2 MMP23B MIR429 ATAD3C ANKRD65 CPTP LOC148413 SDF4 MIB2 CPSF3L MIR200A FNDC10 SSU72 PUSL1 ATAD3A ACAP3 ATAD3B SCNN1D B3GALT6 TTLL10-AS1 TNFRSF18 LINC01342 LOC102724312
nsv1000169 Chr.1:1281678 - 1362354 on Build GRCh38 Gain CPTP TAS1R3 ACAP3 DVL1 MIR6808 SCNN1D CPSF3L MIR6726 PUSL1 MXRA8 MIR6727
esv2758912 Chr.1:1263940 - 1384492 on Build GRCh38 Loss CPTP TAS1R3 CPSF3L MIR6726 UBE2J2 PUSL1 MXRA8 MIR6727 ACAP3 DVL1 MIR6808 SCNN1D AURKAIP1
dgv2n67 Chr.1:877618 - 1426500 on Build GRCh38 Gain FAM132A TAS1R3 TTLL10 SAMD11 HES4 LOC100130417 ISG15 MIR6726 MRPL20 UBE2J2 AGRN TMEM88B TNFRSF4 MXRA8 MIR6727 LOC100288175 LOC105378948 PLEKHN1 MIR200B DVL1 MIR6808 LOC107985728 AURKAIP1 NOC2L C1orf159 CCNL2 MIR429 ANKRD65 CPTP LOC284600 LOC148413 SDF4 CPSF3L MIR200A PERM1 PUSL1 ACAP3 SCNN1D KLHL17 B3GALT6 RNF223 TTLL10-AS1 TNFRSF18 LINC01342
nsv469848 Chr.1:1146082 - 1322235 on Build GRCh38 Gain FAM132A TTLL10 SDF4 CPSF3L MIR200A MIR6726 UBE2J2 PUSL1 TNFRSF4 MIR6727 ACAP3 MIR200B SCNN1D B3GALT6 TTLL10-AS1 TNFRSF18 MIR429

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More Information


Set Membership:

 Intragenic Intronic Non-exonic DGV Variation

Gene Ontology Categories:

Function(s) Process(es)


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