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See other RPUSD1 CNV Assays ›
Gene Symbol
RPUSD1
Assay Reference Genome
Location

Chr.16:785034 on build GRCh38
Cytoband
16p13.3
Assay ID Hs02276014_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 113000

Gene Name:

 RNA pseudouridylate synthase domain containing 1

Gene Aliases:

 C16orf40, RLUCL

Location:

 Chr.16:784974-788383 on Build GRCh38

Assay Gene Location:

 Within Exon 6
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
RPUSD1 NM_001324086.1 6 1999 NP_001311015.1
NM_001324410.1 6 1900 NP_001311339.1
NM_001324411.1 5 1887 NP_001311340.1
NM_001324412.1 5 1801 NP_001311341.1
NM_001324413.1 6 1891 NP_001311342.1
NM_001324414.1 6 1947 NP_001311343.1
NM_001324415.1 6 2000 NP_001311344.1
NM_058192.2 6 1990 NP_478072.1
BC011783.2 AAH11783.1
BC012951.2 AAH12951.2
CB529100.1 1 78

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
dgv4828n54 Chr.16:760143 - 828324 on Build GRCh38 Gain CHTF18 GNG13 PRR25 RPUSD1 MSLN MIR662
esv3637582 Chr.16:751057 - 851536 on Build GRCh38 Gain CHTF18 GNG13 PRR25 RPUSD1 MSLN MIR662
nsv817712 Chr.16:774098 - 810673 on Build GRCh38 Loss CHTF18 GNG13 PRR25 RPUSD1
esv2422427 Chr.16:10001 - 2723164 on Build GRCh38 Duplication MIR6768 SNORA64 MIR3178 DECR2 C16orf91 ZNF598 TPSB2 AMDHD2 PKD1 AXIN1 BAIAP3 ECI1 SNORA78 LOC105371038 ABCA3 PDPK1 RHOT2 LINC00254 SSTR5 RNPS1 MIR3176 MIR3177 LOC105371184 LOC107987233 LOC100134368 MIR6767 SSTR5-AS1 MIR662 HBA2 NDUFB10 DDX11L10 PRR25 ATP6V0C CCNF METRN RPL23AP5 RAB11FIP3 LOC101929280 LOC106660606 RPS2 GFER CRAMP1 WDR90 TSR3 RAB26 TMEM8A BRICD5 WFIKKN1 TPSG1 MCRIP2 MAPK8IP3 TPSD1 UNKL MIR5587 IGFALS MSRB1 TMEM204 MIR4717 IFT140 RHBDF1 LOC107984876 TPSAB1 CACNA1H RHBDL1 RAB40C KCTD5 NHLRC4 PRSS29P MIR3180-5 RNF151 JMJD8 NARFL NOXO1 SNORD60 PRR35 MPG PIGQ HBZ FAM234A MIR6511B1 RPL3L MIR940 HS3ST6 PRSS27 NTN3 UBE2I SLC9A3R2 ERVK13-1 GNG13 MLST8 HBQ1 PGP TBC1D24 TRAF7 SNHG9 E4F1 SYNGR3 ABCA17P CAPN15 SNRNP25 HBM CCDC154 DNASE1L2 NTHL1 TSC2 LINC00235 MRPL28 LOC105371049 EME2 LMF1-AS1 LUC7L WASIR2 NME4 ARHGDIG WDR24 NPW LOC100287175 C1QTNF8 LOC105371047 MIR1225 CASKIN1 METTL26 SPSB3 FAM173A FBXL16 FAHD1 LOC729652 MEIOB SNORA10 C16orf59 RPUSD1 CLCN7 LOC652276 SNHG19 POLR3K PTX4 HBA1 CCDC78 SOX8 TBL3 CEMP1 PDIA2 NUBP2 MIR4516 STUB1 CHTF18 MIR3677 NPRL3 FLJ42627 LOC105371046 MRPS34 HAGHL TELO2 GNPTG MIR6859-4 HAGH LMF1 HN1L LOC105371045 NME3 MSLN RGS11
nsv471063 Chr.16:520623 - 852322 on Build GRCh38 Loss GNG13 METTL26 FAM173A WFIKKN1 FBXL16 MCRIP2 MIR5587 CAPN15 LOC105371038 RPUSD1 RHOT2 LINC00235 RHBDL1 CCDC78 RAB40C NHLRC4 STUB1 CHTF18 JMJD8 NARFL MIR3176 LOC105371184 LOC107987233 PRR35 HAGHL PIGQ MIR662 PRR25 METRN WDR24 LOC100287175 RAB11FIP3 LOC101929280 MSLN WDR90
nsv9321 Chr.16:638149 - 804328 on Build GRCh38 Gain+Loss STUB1 CHTF18 GNG13 JMJD8 NARFL FAM173A FBXL16 MCRIP2 LOC105371184 HAGHL MIR662 LOC105371038 RPUSD1 METRN WDR24 RHOT2 LOC100287175 RHBDL1 CCDC78 MSLN WDR90
nsv526903 Chr.16:451362 - 810673 on Build GRCh38 Loss GNG13 METTL26 FAM173A WFIKKN1 FBXL16 MCRIP2 MIR5587 CAPN15 LOC105371038 RPUSD1 RHOT2 LINC00235 RHBDL1 CCDC78 RAB40C NHLRC4 STUB1 CHTF18 JMJD8 NARFL MIR3176 LOC105371184 LOC107987233 PRR35 HAGHL PIGQ MIR662 PRR25 METRN WDR24 LOC100287175 RAB11FIP3 LOC101929280 MSLN WDR90
nsv952898 Chr.16:495001 - 1132900 on Build GRCh38 Deletion GNG13 METTL26 FAM173A WFIKKN1 FBXL16 MCRIP2 MIR5587 CAPN15 LOC105371038 RPUSD1 RHOT2 LINC00235 LOC107984876 RHBDL1 CCDC78 SOX8 RAB40C LMF1-AS1 NHLRC4 STUB1 CHTF18 SSTR5 JMJD8 NARFL MIR3176 LOC105371184 LOC107987233 PRR35 HAGHL PIGQ SSTR5-AS1 MIR662 PRR25 LMF1 METRN WDR24 LOC100287175 RAB11FIP3 LOC101929280 MSLN WDR90 C1QTNF8
nsv457312 Chr.16:760039 - 797743 on Build GRCh38 Loss CHTF18 RPUSD1 MSLN MIR662
nsv1160326 Chr.16:580902 - 804689 on Build GRCh38 Duplication GNG13 METTL26 FAM173A WFIKKN1 FBXL16 MCRIP2 LOC105371038 RPUSD1 RHOT2 RHBDL1 CCDC78 RAB40C STUB1 CHTF18 JMJD8 NARFL LOC105371184 HAGHL PIGQ MIR662 METRN WDR24 LOC100287175 LOC101929280 MSLN WDR90
nsv1160325 Chr.16:506925 - 836376 on Build GRCh38 Duplication GNG13 METTL26 FAM173A WFIKKN1 FBXL16 MCRIP2 MIR5587 CAPN15 LOC105371038 RPUSD1 RHOT2 LINC00235 RHBDL1 CCDC78 RAB40C NHLRC4 STUB1 CHTF18 JMJD8 NARFL MIR3176 LOC105371184 LOC107987233 PRR35 HAGHL PIGQ MIR662 PRR25 METRN WDR24 LOC100287175 RAB11FIP3 LOC101929280 MSLN WDR90

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More Information


Set Membership:

 Intragenic Exonic DGV Variation

Panther Classification:

Molecular Function -

RNA processing factor

Gene Ontology Categories:

Function(s) Process(es)


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