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See other RPUSD1 CNV Assays ›
Gene Symbol
RPUSD1
Assay Reference Genome
Location

Chr.16:785034 on build GRCh38
Cytoband
16p13.3
Assay ID Hs02276014_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 113000

Gene Name:

 RNA pseudouridylate synthase domain containing 1

Gene Aliases:

 C16orf40, RLUCL

Location:

 Chr.16:784974-788383 on Build GRCh38

Assay Gene Location:

 Within Exon 6
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
RPUSD1 NM_001324086.1 6 1999 NP_001311015.1
NM_001324410.1 6 1900 NP_001311339.1
NM_001324411.1 5 1887 NP_001311340.1
NM_001324412.1 5 1801 NP_001311341.1
NM_001324413.1 6 1891 NP_001311342.1
NM_001324414.1 6 1947 NP_001311343.1
NM_001324415.1 6 2000 NP_001311344.1
NM_058192.2 6 1990 NP_478072.1
BC011783.2 AAH11783.1
BC012951.2 AAH12951.2
CB529100.1 1 78

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
dgv4828n54 Chr.16:760143 - 828324 on Build GRCh38 Gain PRR25 RPUSD1 GNG13 MIR662 MSLN CHTF18
esv3637582 Chr.16:751057 - 851536 on Build GRCh38 Gain PRR25 RPUSD1 GNG13 MIR662 MSLN CHTF18
nsv571040 Chr.16:774098 - 797597 on Build GRCh38 Loss RPUSD1 CHTF18
esv2422427 Chr.16:10001 - 2723164 on Build GRCh38 Duplication NHLRC4 LOC107987233 EME2 HBA2 LOC100134368 KCTD5 NOXO1 PDIA2 SNORA78 MIR940 GNG13 LOC101929280 MIR5587 CRAMP1 C16orf59 HS3ST6 NARFL PRR25 PKD1 ZNF598 HAGH CASKIN1 TSR3 TPSB2 ECI1 SSTR5-AS1 CHTF18 RAB26 LOC729652 RPL23AP5 C16orf91 SNORA64 RHBDL1 RNPS1 RAB11FIP3 FAHD1 LOC105371184 ABCA3 LMF1 METRN IGFALS DNASE1L2 POLR3K NUBP2 HN1L NME3 LOC105371038 METTL26 LOC106660606 FAM173A MIR6768 MSLN ARHGDIG NTHL1 LOC105371045 LOC105371049 ERVK13-1 TRAF7 AMDHD2 CCNF C1QTNF8 GNPTG TPSD1 BAIAP3 LOC652276 LINC00235 SNHG19 MIR662 PRSS29P MIR3178 PRR35 MCRIP2 TELO2 DECR2 NPW MRPL28 PIGQ FLJ42627 SPSB3 TMEM204 UBE2I RHBDF1 RPS2 CEMP1 UNKL CCDC154 MAPK8IP3 MIR6511B1 MLST8 NME4 PRSS27 MIR3180-5 LOC107984876 WFIKKN1 SOX8 PTX4 NTN3 MIR4717 LOC100287175 TBC1D24 LUC7L MIR3177 JMJD8 SSTR5 MIR4516 SNORD60 HBA1 FBXL16 MIR6859-4 WDR24 SNORA10 RNF151 TPSAB1 RPL3L MIR1225 HBM SLC9A3R2 CAPN15 SNHG9 MIR6767 MSRB1 ATP6V0C LOC105371047 WDR90 DDX11L10 MPG RAB40C LMF1-AS1 MRPS34 TBL3 CCDC78 TPSG1 PDPK1 SYNGR3 ABCA17P RPUSD1 HBQ1 LINC00254 TMEM8A CLCN7 MIR3176 SNRNP25 FAM234A CACNA1H NDUFB10 GFER BRICD5 PGP MIR3677 STUB1 LOC105371046 RGS11 HAGHL AXIN1 WASIR2 TSC2 HBZ IFT140 NPRL3 E4F1 RHOT2 MEIOB
nsv9321 Chr.16:638149 - 804328 on Build GRCh38 Gain+Loss MCRIP2 LOC100287175 RPUSD1 HAGHL FAM173A JMJD8 MSLN CHTF18 WDR90 FBXL16 WDR24 RHBDL1 GNG13 LOC105371184 MIR662 METRN NARFL CCDC78 STUB1 LOC105371038 RHOT2
nsv471063 Chr.16:520623 - 852322 on Build GRCh38 Loss METTL26 LOC100287175 RPUSD1 NHLRC4 LOC107987233 FAM173A JMJD8 MSLN MIR3176 FBXL16 WDR24 LINC00235 GNG13 LOC101929280 MIR662 MIR5587 PRR35 NARFL STUB1 MCRIP2 CAPN15 PRR25 HAGHL PIGQ CHTF18 WDR90 RHBDL1 RAB40C RAB11FIP3 LOC105371184 WFIKKN1 METRN CCDC78 LOC105371038 RHOT2
nsv526903 Chr.16:451362 - 810673 on Build GRCh38 Loss METTL26 LOC100287175 RPUSD1 NHLRC4 LOC107987233 FAM173A JMJD8 MSLN MIR3176 FBXL16 WDR24 LINC00235 GNG13 LOC101929280 MIR662 MIR5587 PRR35 NARFL STUB1 MCRIP2 CAPN15 PRR25 HAGHL PIGQ CHTF18 WDR90 RHBDL1 RAB40C RAB11FIP3 LOC105371184 WFIKKN1 METRN CCDC78 LOC105371038 RHOT2
nsv952898 Chr.16:495001 - 1132900 on Build GRCh38 Deletion METTL26 LOC100287175 RPUSD1 NHLRC4 LOC107987233 FAM173A JMJD8 MSLN SSTR5 MIR3176 C1QTNF8 FBXL16 WDR24 LINC00235 GNG13 LOC101929280 MIR662 MIR5587 PRR35 NARFL STUB1 MCRIP2 CAPN15 PRR25 HAGHL PIGQ SSTR5-AS1 CHTF18 WDR90 RHBDL1 RAB40C RAB11FIP3 LOC105371184 LMF1-AS1 LOC107984876 LMF1 WFIKKN1 SOX8 METRN CCDC78 LOC105371038 RHOT2
dgv4827n54 Chr.16:760039 - 810673 on Build GRCh38 Loss PRR25 RPUSD1 GNG13 MIR662 MSLN CHTF18
nsv1160326 Chr.16:580902 - 804689 on Build GRCh38 Duplication METTL26 LOC100287175 RPUSD1 FAM173A JMJD8 MSLN FBXL16 WDR24 GNG13 LOC101929280 MIR662 NARFL STUB1 MCRIP2 HAGHL PIGQ CHTF18 WDR90 RHBDL1 RAB40C LOC105371184 WFIKKN1 METRN CCDC78 LOC105371038 RHOT2
nsv1160325 Chr.16:506925 - 836376 on Build GRCh38 Duplication METTL26 LOC100287175 RPUSD1 NHLRC4 LOC107987233 FAM173A JMJD8 MSLN MIR3176 FBXL16 WDR24 LINC00235 GNG13 LOC101929280 MIR662 MIR5587 PRR35 NARFL STUB1 MCRIP2 CAPN15 PRR25 HAGHL PIGQ CHTF18 WDR90 RHBDL1 RAB40C RAB11FIP3 LOC105371184 WFIKKN1 METRN CCDC78 LOC105371038 RHOT2

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More Information


Set Membership:

 Intragenic Exonic DGV Variation

Panther Classification:

Molecular Function -

RNA processing factor

Gene Ontology Categories:

Function(s) Process(es)


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