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See other SNRNP200 CNV Assays ›
Gene Symbol
SNRNP200
Assay Reference Genome
Location

Chr.2:96285261 on build GRCh38
Cytoband
2q11.2
Assay ID Hs02293144_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 23020

Gene Name:

 small nuclear ribonucleoprotein U5 subunit 200

Gene Aliases:

 ASCC3L1, BRR2, HELIC2, RP33, U5-200KD

Location:

 Chr.2:96274336-96321893 on Build GRCh38

Assay Gene Location:

 Within Exon 32
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
SNRNP200 NM_014014.4 30 4215 NP_054733.2
XM_017003603.1 32 5045 XP_016859092.1
AB018331.2 28 3753 BAA34508.2
AK021583.1 1 1044
AK023840.1 24 3226 BAB14698.1
AK024391.1 24 3296 BAB14906.1
AK090671.1 BAC03499.1
AK303465.1 1 116
AK303663.1 1 60
AL831994.1 21 2931
AY572488.1 30 4161 AAS78571.1
BC007577.1 12 1599 AAH07577.1
BC065924.1 23 3138 AAH65924.1
BC112891.1 24 3336
BC131784.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv834305 Chr.2:96183160 - 96353738 on Build GRCh38 Gain ITPRIPL1 STARD7 SNRNP200 STARD7-AS1 NCAPH LOC105373495 TMEM127 CIAO1
nsv508155 Chr.2:96268957 - 96472565 on Build GRCh38 Deletion ITPRIPL1 SNRNP200 NCAPH LOC105373495 CIAO1
dgv607e201 Chr.2:95855884 - 97561622 on Build GRCh38 Deletion ITPRIPL1 ANKRD39 STARD7 FAHD2B ANKRD36B ANKRD36C LOC100506123 LOC105373495 CNNM3 ANKRD23 FAHD2CP ANKRD36 SEMA4C STARD7-AS1 GPAT2 NEURL3 LOC105373496 ASTL KANSL3 DUSP2 LMAN2L ARID5A FAM178B SNRNP200 LOC107984110 LOC653924 ADRA2B MIR3127 LOC101927053 CNNM4 NCAPH LOC100506076 FER1L5 TMEM127 CIAO1
nsv1135873 Chr.2:95981454 - 97579645 on Build GRCh38 Deletion ITPRIPL1 ANKRD39 STARD7 FAHD2B ANKRD36B ANKRD36C LOC100506123 LOC105373495 CNNM3 ANKRD23 FAHD2CP ANKRD36 SEMA4C STARD7-AS1 GPAT2 NEURL3 LOC105373496 ASTL KANSL3 DUSP2 LMAN2L ARID5A FAM178B SNRNP200 LOC107984110 LOC653924 ADRA2B MIR3127 LOC101927053 CNNM4 NCAPH LOC100506076 FER1L5 TMEM127 CIAO1
esv3425717 Chr.2:95859900 - 97515905 on Build GRCh38 Duplication ITPRIPL1 ANKRD39 STARD7 FAHD2B ANKRD36B ANKRD36C LOC100506123 LOC105373495 CNNM3 ANKRD23 FAHD2CP ANKRD36 SEMA4C STARD7-AS1 GPAT2 NEURL3 LOC105373496 ASTL KANSL3 DUSP2 LMAN2L ARID5A FAM178B SNRNP200 LOC107984110 LOC653924 ADRA2B MIR3127 LOC101927053 CNNM4 NCAPH LOC100506076 FER1L5 TMEM127 CIAO1

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