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See other TRAPPC2L CNV Assays ›
Gene Symbol
TRAPPC2L
Assay Reference Genome
Location

Chr.16:88858804 on build GRCh38
Cytoband
16q24.3
Assay ID Hs02316044_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 51693

Gene Name:

 trafficking protein particle complex 2-like

Gene Aliases:

 HSPC176

Location:

 Chr.16:88856220-88862686 on Build GRCh38

Assay Gene Location:

 Overlaps Exon 3 - Intron 3
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
TRAPPC2L NM_001318524.1 NP_001305453.1
NM_001318525.1 NP_001305454.1
NM_001318526.1 NP_001305455.1
NM_001318527.1 NP_001305456.1
NM_001318528.1 NP_001305457.1
NM_001318529.1 NP_001305458.1
NM_001318530.1 NP_001305459.1
NM_001318532.1 NP_001305461.1
NM_016209.4 NP_057293.1
NR_134670.1
NR_134671.1
XM_017023270.1 XP_016878759.1
AF089106.1 AAF00568.1
AF161524.1 AAF29139.1
AK126779.1 BAC86686.1
AK307253.1
AK310805.1
AK311885.1
AX771012.1 CAE01175.1
AX771013.1 CAE01176.1
AX771014.1 CAE01177.1
BC011369.1 AAH11369.1
BC018024.1 AAH18024.1
BC105809.1 AAI05810.1
BG283878.1
BI754306.1
BX340702.2
BX384775.2
BX419849.2
DA209193.1
DA293122.1
DA295904.1
DA833474.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
dgv37n68 Chr.16:88767460 - 88944903 on Build GRCh38 Loss PABPN1L CDT1 GALNS LOC107987238 LOC100129697 TRAPPC2L APRT CBFA2T3 PIEZO1 LOC105371409 LOC101927793
nsv1063024 Chr.16:88707330 - 89238482 on Build GRCh38 Gain PABPN1L LINC00304 CDT1 GALNS LOC107987238 LOC100129697 CTU2 APRT ACSF3 MIR4722 ZNF778 PIEZO1 LOC105371409 TRAPPC2L SLC22A31 CDH15 CBFA2T3 LOC100289580 LOC400558 LOC339059 LOC101927793
nsv471115 Chr.16:88801844 - 89197442 on Build GRCh38 Loss PABPN1L LINC00304 CDT1 GALNS LOC107987238 LOC100129697 APRT ACSF3 LOC105371409 TRAPPC2L SLC22A31 CDH15 CBFA2T3 LOC400558 LOC101927793
nsv573674 Chr.16:88738775 - 89325907 on Build GRCh38 Gain PABPN1L LINC00304 CDT1 GALNS LOC107987238 LOC100129697 APRT ACSF3 ANKRD11 ZNF778 PIEZO1 LOC105371409 LOC105371414 TRAPPC2L LOC100287036 SLC22A31 CDH15 CBFA2T3 LOC100289580 LOC400558 LOC339059 LOC101927793
esv3639555 Chr.16:88745961 - 88899576 on Build GRCh38 Gain PABPN1L CDT1 GALNS LOC107987238 TRAPPC2L APRT CBFA2T3 PIEZO1 LOC101927793
nsv819907 Chr.16:88805821 - 88860813 on Build GRCh38 Gain CDT1 GALNS LOC107987238 TRAPPC2L APRT
nsv952071 Chr.16:88790893 - 89019992 on Build GRCh38 Deletion PABPN1L CDT1 GALNS LOC107987238 LOC100129697 TRAPPC2L APRT CBFA2T3 LOC105371409 LOC101927793
nsv482951 Chr.16:88633593 - 90228345 on Build GRCh38 Loss MVD FANCA TUBB8P7 SPG7 ANKRD11 MIR4722 PIEZO1 SPATA33 LOC105371419 LOC105371414 CDK10 LOC107984817 DBNDD1 AFG3L1P CBFA2T3 LOC400558 TUBB3 LINC00304 CDT1 LOC100129697 ACSF3 LOC101927817 FAM157C ZNF778 CENPBD1 LOC105371409 PRDM7 TRAPPC2L LOC100287036 CPNE7 DPEP1 CDH15 LOC100289580 GAS8-AS1 IL17C GALNS LOC107987238 CTU2 URAHP SNAI3-AS1 MC1R DEF8 VPS9D1 SLC22A31 LOC339059 VPS9D1-AS1 ZNF276 PABPN1L SNORD68 RPL13 APRT SPIRE2 GAS8 SPATA2L CYBA TCF25 CHMP1A RNF166 SNAI3 LOC101927793
esv3639561 Chr.16:88837996 - 88882065 on Build GRCh38 Gain PABPN1L GALNS TRAPPC2L CBFA2T3
nsv1063441 Chr.16:88767066 - 88861882 on Build GRCh38 Loss CDT1 GALNS LOC107987238 TRAPPC2L APRT PIEZO1
dgv3065n100 Chr.16:88711587 - 88927172 on Build GRCh38 Gain PABPN1L CDT1 GALNS LOC107987238 CTU2 APRT MIR4722 PIEZO1 TRAPPC2L CBFA2T3 LOC100289580 LOC339059 LOC101927793

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More Information


Set Membership:

 Intragenic Non-exonic DGV Variation

Panther Classification:

Molecular Function -

membrane traffic protein

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