Genomic Map
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Target Gene Details
Entrez Gene ID: | 284415 |
Gene Name: | V-set and transmembrane domain containing 1 |
Gene Aliases: |
SIRL-1, SIRL1, UNQ3033 |
Location: |
Chr.19:54040825-54063966 on Build GRCh38 |
Assay Gene Location: | Overlaps Intron 1 - Exon 2 |
| Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
|---|---|---|---|---|
| VSTM1 | NM_001288791.1 | NP_001275720.1 | ||
| NM_001288792.1 | NP_001275721.1 | |||
| NM_001288793.1 | NP_001275722.1 | |||
| NM_198481.3 | NP_940883.2 | |||
| NR_110142.1 | ||||
| XM_011526845.1 | XP_011525147.1 | |||
| XM_011526846.1 | XP_011525148.1 | |||
| XM_011526847.1 | XP_011525149.1 | |||
| XM_011526848.1 | XP_011525150.1 | |||
| XM_011526849.1 | XP_011525151.1 | |||
| XM_017026666.1 | XP_016882155.1 | |||
| AY358542.1 | AAQ88906.1 | |||
| BC100943.2 | AAI00944.1 | |||
| DQ479397.1 | ||||
| FJ584316.1 | ||||
| FJ584317.1 | ||||
| FJ584318.1 | ||||
| FJ584319.1 | ||||
| FJ584320.1 | ||||
| FJ882051.1 | ||||
| FN398145.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
| Target Variation |
Location | CNV Subtype |
Genes |
|---|---|---|---|
| nsv458782 | Chr.19:53961144 - 54093354 on Build GRCh38 | Gain |
 VSTM1
CACNG8
CACNG6
TARM1
MIR935
|
| nsv510773 | Chr.19:54017180 - 54132236 on Build GRCh38 | Deletion |
VSTM1
NDUFA3
TFPT
PRPF31
OSCAR
TARM1
|
| nsv182 | Chr.19:54050737 - 54097924 on Build GRCh38 | Deletion |
VSTM1
OSCAR
TARM1
|
| nsv1063127 | Chr.19:53926876 - 54068977 on Build GRCh38 | Gain |
VSTM1
CACNG7
CACNG8
CACNG6
MIR935
|
| esv2718812 | Chr.19:53184636 - 54322450 on Build GRCh38 | Deletion |
RPS9
MIR373
ZNF525
TSEN34
MIR521-1
MIR520A
MIR519D
MIR519A1
MIR512-1
ZNF331
MIR518F
MIR526A2
ZNF761
TARM1
MIR517B
MIR519C
MIR524
LILRB2
VN1R4
MIR1283-1
VN1R2
MIR518B
CACNG8
LOC284379
MIR520E
VSTM1
ZNF765
MIR523
MIR522
MIR518D
MIR519A2
LILRB5
NLRP12
MIR520C
MIR519E
MIR518A2
MIR518E
ZNF845
FAM90A27P
TMC4
LILRA6
DPRX
MIR515-1
NDUFA3
MYADM
MIR521-2
MIR1283-2
TFPT
MIR512-2
MIR520H
PRPF31
MIR526B
MIR525
ZNF665
MIR518A1
ZNF818P
MIR371A
CACNG7
ZNF813
MIR527
MIR516A1
MIR371B
CNOT3
MIR372
MIR526A1
MIR517A
PRKCG
MIR518C
MIR935
MIR4752
MIR516B1
MIR516A2
MIR515-2
MIR1323
MBOAT7
MIR517C
MIR498
MIR520F
MIR519B
MIR520G
LILRA5
MIR520B
LENG1
BIRC8
TPM3P9
MIR520D
LOC105372457
LILRB3
MIR516B2
ZNF677
OSCAR
CACNG6
|
| dgv663e199 | Chr.19:54051591 - 54059132 on Build GRCh38 | Deletion |
VSTM1
|
| esv3644780 | Chr.19:54057724 - 54066399 on Build GRCh38 | Gain |
VSTM1
|
| nsv833877 | Chr.19:53951529 - 54117323 on Build GRCh38 | Loss |
VSTM1
NDUFA3
TFPT
PRPF31
CACNG8
OSCAR
CACNG6
TARM1
MIR935
|
Back To TopMore Information
Set Membership: |
Intragenic
Non-exonic
DGV Variation
|
Panther Classification:
Gene Ontology Categories:
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