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See other SAPCD2 CNV Assays ›
Gene Symbol
SAPCD2
Assay Reference Genome
Location

Chr.9:137065653 on build GRCh38
Cytoband
9q34.3
Assay ID Hs02323382_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 89958

Gene Name:

 suppressor APC domain containing 2

Gene Aliases:

 C9orf140, p42.3

Location:

 Chr.9:137062127-137070576 on Build GRCh38

Assay Gene Location:

 Overlaps Intron 3 - Exon 4
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
SAPCD2 NM_178448.3 NP_848543.2
XM_011519180.2 XP_011517482.1
BC048267.1 AAH48267.1
DQ150361.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
dgv13007n54 Chr.9:136966179 - 137173890 on Build GRCh38 Loss LRRC26 MAN1B1-AS1 MIR3621 ABCA2 DPP7 UAP1L1 FUT7 CLIC3 MAN1B1 ENTPD2 PTGDS LOC101930307 NPDC1 LCNL1 C9orf139 GRIN1 SAPCD2 TMEM210 C9orf142 PRR31
nsv831761 Chr.9:137049674 - 137166473 on Build GRCh38 Loss MAN1B1-AS1 LOC101930307 GRIN1 DPP7 SAPCD2 UAP1L1 MAN1B1 ENTPD2
nsv616006 Chr.9:137057859 - 137083633 on Build GRCh38 Loss SAPCD2 UAP1L1
nsv524322 Chr.9:136795692 - 137482216 on Build GRCh38 Loss LRRC26 TMEM203 PNPLA7 NRARP MIR3621 DPP7 PHPT1 TPRN FUT7 CLIC3 ANAPC2 FBXW5 CYSRT1 NELFB CCDC183 C9orf139 EXD3 TMEM210 FAM166A MIR4479 NDOR1 STPG3 MIR7114 RNF208 MAMDC4 UAP1L1 ENTPD2 ENTPD8 RNF224 SSNA1 LOC101930307 LCNL1 CCDC183-AS1 C8G C9orf172 MAN1B1-AS1 MAN1B1 TRAF2 PTGDS RABL6 SAPCD2 NSMF ABCA2 TOR4A MIR4292 LCN12 TUBB4B EDF1 NPDC1 GRIN1 NOXA1 C9orf173-AS1 C9orf142 SLC34A3 PRR31
nsv951206 Chr.9:136944849 - 137114548 on Build GRCh38 Deletion MAN1B1-AS1 ABCA2 DPP7 UAP1L1 FUT7 CLIC3 MAN1B1 ENTPD2 PTGDS LCN12 LOC101930307 NPDC1 LCNL1 C9orf139 SAPCD2 C8G C9orf142 PRR31
nsv469918 Chr.9:136359865 - 137173890 on Build GRCh38 Loss MIR4673 LRRC26 SDCCAG3 MIR3621 DPP7 PHPT1 FUT7 CLIC3 FBXW5 SNHG7 SEC16A CCDC183 C9orf139 NALT1 TMEM210 C9orf163 MIR4479 LCN8 LINC01451 TMEM141 MAMDC4 UAP1L1 ENTPD2 DNLZ LCN6 LOC101930307 LCNL1 CCDC183-AS1 C8G MIR4674 CARD9 C9orf172 MAN1B1-AS1 MIR6722 AGPAT2 MAN1B1 EGFL7 NOTCH1 SNAPC4 TRAF2 PTGDS PMPCA LCN15 SNORA17A HSPC324 RABL6 SAPCD2 SNORA17B LOC100128593 ABCA2 FAM69B MIR4292 MIR126 LCN12 EDF1 NPDC1 GRIN1 LCN10 INPP5E C9orf142 PRR31
esv2761561 Chr.9:137030185 - 137191593 on Build GRCh38 Gain LRRC26 MAN1B1-AS1 MIR3621 DPP7 UAP1L1 FUT7 MAN1B1 ANAPC2 ENTPD2 SSNA1 LOC101930307 NPDC1 C9orf139 GRIN1 SAPCD2 TMEM210
nsv616005 Chr.9:137036493 - 137173890 on Build GRCh38 Loss LRRC26 MAN1B1-AS1 MIR3621 DPP7 UAP1L1 MAN1B1 ENTPD2 LOC101930307 NPDC1 C9orf139 GRIN1 SAPCD2 TMEM210
esv2422220 Chr.9:136584135 - 137350098 on Build GRCh38 Deletion LRRC26 TMEM203 NRARP MIR3621 DPP7 PHPT1 TPRN FUT7 CLIC3 ANAPC2 FBXW5 SNHG7 CYSRT1 NELFB CCDC183 C9orf139 EXD3 TMEM210 FAM166A MIR4479 LCN8 LINC01451 NDOR1 STPG3 TMEM141 RNF208 MAMDC4 UAP1L1 ENTPD2 LCN6 RNF224 SSNA1 LOC101930307 LCNL1 CCDC183-AS1 C8G C9orf172 MAN1B1-AS1 MIR6722 AGPAT2 MAN1B1 EGFL7 TRAF2 PTGDS LCN15 SNORA17A HSPC324 RABL6 SAPCD2 SNORA17B LOC100128593 ABCA2 TOR4A FAM69B MIR4292 MIR126 LCN12 TUBB4B EDF1 NPDC1 GRIN1 LCN10 C9orf173-AS1 C9orf142 SLC34A3 PRR31
nsv982354 Chr.9:137057355 - 137073859 on Build GRCh38 Duplication SAPCD2

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More Information


Set Membership:

 Intragenic Non-exonic DGV Variation

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