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See other PTGDS CNV Assays ›
Gene Symbol
PTGDS
Assay Reference Genome
Location

Chr.9:136980223 on build GRCh38
Cytoband
9q34.3
Assay ID Hs02329407_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 5730

Gene Name:

 prostaglandin D2 synthase

Gene Aliases:

 L-PGDS, LPGDS, PDS, PGD2, PGDS, PGDS2

Location:

 Chr.9:136977504-136981742 on Build GRCh38

Assay Gene Location:

 Within Exon 5
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
PTGDS NM_000954.5 5 564 NP_000945.3
AA621632.1 3 264
AI659247.1
AK075333.1 5 564
AK312817.1 5 551
AY026356.1 5 489 AAK07679.1
BC005939.1 5 498 AAH05939.1
BG037037.1 5 568
BM686612.1 5 552
BT019921.1 5 489 AAV38724.1
BT019922.1 5 489 AAV38725.1
M61900.2 5 554

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
dgv13008n54 Chr.9:136977199 - 136980285 on Build GRCh38 Loss PTGDS
dgv13007n54 Chr.9:136966179 - 137173890 on Build GRCh38 Loss PTGDS ABCA2 SAPCD2 C9orf142 LOC101930307 CLIC3 NPDC1 GRIN1 DPP7 MAN1B1-AS1 TMEM210 FUT7 MAN1B1 LRRC26 PRR31 LCNL1 C9orf139 UAP1L1 ENTPD2 MIR3621
nsv615991 Chr.9:136972675 - 137011907 on Build GRCh38 Loss PTGDS ABCA2 C9orf142 PRR31 LCNL1 CLIC3
nsv615993 Chr.9:136975638 - 136983246 on Build GRCh38 Gain PTGDS LCNL1
nsv818738 Chr.9:136740043 - 137009585 on Build GRCh38 Gain PTGDS EDF1 RABL6 ABCA2 C9orf142 CCDC183 LOC100128593 MAMDC4 CLIC3 FBXW5 LCNL1 CCDC183-AS1 TMEM141 C8G PHPT1 MIR4292 TRAF2 LCN15 LCN10 MIR4479 C9orf172 LCN8 LCN6 LCN12 PRR31 MIR6722
nsv524322 Chr.9:136795692 - 137482216 on Build GRCh38 Loss EDF1 RABL6 ABCA2 MAMDC4 FUT7 LRRC26 FBXW5 LCNL1 UAP1L1 C8G MIR3621 PHPT1 SAPCD2 MIR4292 SSNA1 NPDC1 ENTPD8 MIR4479 C9orf172 TPRN TUBB4B NSMF PTGDS CYSRT1 C9orf142 STPG3 CCDC183 RNF224 FAM166A SLC34A3 CLIC3 DPP7 MAN1B1-AS1 PNPLA7 C9orf173-AS1 MAN1B1 TOR4A C9orf139 NRARP CCDC183-AS1 MIR7114 NELFB EXD3 NDOR1 LOC101930307 TMEM203 TRAF2 GRIN1 TMEM210 NOXA1 RNF208 ANAPC2 LCN12 PRR31 ENTPD2
nsv951206 Chr.9:136944849 - 137114548 on Build GRCh38 Deletion PTGDS ABCA2 SAPCD2 C9orf142 LOC101930307 CLIC3 NPDC1 DPP7 MAN1B1-AS1 FUT7 MAN1B1 LCN12 PRR31 LCNL1 C9orf139 UAP1L1 C8G ENTPD2
nsv469918 Chr.9:136359865 - 137173890 on Build GRCh38 Loss EDF1 RABL6 ABCA2 SEC16A MAMDC4 SNHG7 LINC01451 FAM69B FUT7 MIR4673 LRRC26 NALT1 FBXW5 LCNL1 NOTCH1 UAP1L1 C8G MIR3621 SNORA17B PHPT1 SAPCD2 MIR4292 NPDC1 LCN10 AGPAT2 SNAPC4 MIR4479 C9orf172 LCN8 C9orf163 CARD9 LCN6 PTGDS C9orf142 PMPCA CCDC183 DNLZ LOC100128593 HSPC324 CLIC3 INPP5E DPP7 MAN1B1-AS1 MAN1B1 C9orf139 CCDC183-AS1 TMEM141 SDCCAG3 EGFL7 MIR126 SNORA17A LOC101930307 TRAF2 LCN15 GRIN1 TMEM210 LCN12 MIR4674 PRR31 MIR6722 ENTPD2
nsv616002 Chr.9:136977855 - 136981118 on Build GRCh38 Loss PTGDS
esv2422220 Chr.9:136584135 - 137350098 on Build GRCh38 Deletion EDF1 RABL6 ABCA2 MAMDC4 SNHG7 LINC01451 FAM69B FUT7 LRRC26 FBXW5 LCNL1 UAP1L1 C8G MIR3621 SNORA17B PHPT1 SAPCD2 MIR4292 SSNA1 NPDC1 LCN10 AGPAT2 MIR4479 C9orf172 LCN8 TPRN LCN6 TUBB4B PTGDS CYSRT1 C9orf142 STPG3 CCDC183 RNF224 LOC100128593 FAM166A HSPC324 SLC34A3 CLIC3 DPP7 MAN1B1-AS1 C9orf173-AS1 MAN1B1 TOR4A C9orf139 NRARP CCDC183-AS1 TMEM141 NELFB EXD3 EGFL7 MIR126 NDOR1 SNORA17A LOC101930307 TMEM203 TRAF2 LCN15 GRIN1 TMEM210 RNF208 ANAPC2 LCN12 PRR31 MIR6722 ENTPD2

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