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See other CASKIN1 CNV Assays ›
Gene Symbol
CASKIN1
Assay Reference Genome
Location

Chr.16:2183953 on build GRCh38
Cytoband
16p13.3
Assay ID Hs02345058_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 57524

Gene Name:

 CASK interacting protein 1

Gene Aliases:

 ANKS5A

Location:

 Chr.16:2177183-2196464 on Build GRCh38

Assay Gene Location:

 Overlaps Intron 14 - Exon 15
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
CASKIN1 NM_020764.3 NP_065815.1
AB037727.1 BAA92544.1
AF451977.1 AAL49758.1
BC042011.1 AAH42011.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
esv2422427 Chr.16:10001 - 2723164 on Build GRCh38 Duplication ARHGDIG KCTD5 C16orf59 MIR3176 TELO2 LOC106660606 LOC105371184 DNASE1L2 SNORA64 TMEM204 RPS2 LOC107984876 DECR2 JMJD8 LOC107987233 LOC652276 ECI1 SPSB3 AXIN1 DDX11L10 MIR6767 MIR3177 PRSS27 FAHD1 CCDC78 ABCA3 STUB1 PRSS29P MIR6859-4 RNF151 MIR3677 TRAF7 NARFL HAGH LOC105371049 CACNA1H MIR6511B1 SSTR5 MCRIP2 RGS11 CCDC154 PDPK1 HAGHL WFIKKN1 FBXL16 CEMP1 HBM TBL3 SNORA10 GFER TPSD1 LMF1 TBC1D24 WDR24 SSTR5-AS1 TMEM8A EME2 MEIOB HS3ST6 FAM173A RNPS1 E4F1 FLJ42627 ABCA17P TSC2 WASIR2 RPUSD1 TPSG1 LOC101929280 PTX4 MIR6768 C16orf91 SNORA78 METTL26 HBZ SNRNP25 MIR4717 CLCN7 NDUFB10 NME4 RPL23AP5 POLR3K MIR5587 LUC7L LINC00235 BAIAP3 SLC9A3R2 CASKIN1 LOC100134368 MSLN NOXO1 FAM234A NUBP2 CHTF18 MLST8 TPSAB1 PDIA2 MIR1225 LOC729652 WDR90 NTN3 SNHG9 LINC00254 PIGQ ERVK13-1 SYNGR3 MAPK8IP3 METRN LOC105371046 GNG13 MIR4516 LOC105371038 MIR940 CAPN15 MSRB1 MPG TSR3 MRPS34 LMF1-AS1 SOX8 PGP LOC105371047 TPSB2 IGFALS NTHL1 HBA2 PRR25 LOC105371045 C1QTNF8 SNORD60 RPL3L NPW PRR35 MIR3180-5 ZNF598 RAB40C CCNF UNKL MIR3178 MRPL28 RHBDL1 RAB11FIP3 UBE2I CRAMP1 LOC100287175 BRICD5 SNHG19 RAB26 AMDHD2 GNPTG HN1L IFT140 MIR662 RHBDF1 NME3 HBA1 ATP6V0C HBQ1 NPRL3 RHOT2 PKD1 NHLRC4
dgv4859n54 Chr.16:1971892 - 2264400 on Build GRCh38 Loss SLC9A3R2 CASKIN1 SNORD60 DNASE1L2 NPW TBL3 MIR3180-5 GFER NOXO1 ZNF598 MLST8 MIR1225 RNPS1 E4F1 ECI1 TSC2 BRICD5 SNHG19 RAB26 SYNGR3 MIR4516 TRAF7 PGP LOC105371049 NTHL1 PKD1 MIR6511B1
dgv4861n54 Chr.16:2083900 - 2246850 on Build GRCh38 Loss BRICD5 CASKIN1 SNORD60 SNHG19 RAB26 DNASE1L2 MIR4516 MIR3180-5 MLST8 TRAF7 PGP MIR1225 E4F1 LOC105371049 ECI1 PKD1 TSC2 MIR6511B1
dgv4863n54 Chr.16:2141733 - 2274302 on Build GRCh38 Loss BRICD5 CASKIN1 SNORD60 LOC106660606 SNHG19 RAB26 DNASE1L2 MIR940 MLST8 MIR3677 TRAF7 PGP RNPS1 E4F1 ECI1
nsv571190 Chr.16:2055054 - 2200730 on Build GRCh38 Loss CASKIN1 SNORD60 TRAF7 SNHG19 RAB26 MIR1225 MIR4516 MIR3180-5 LOC105371049 PKD1 TSC2 MIR6511B1
nsv1052260 Chr.16:2074546 - 2629655 on Build GRCh38 Gain C16orf59 CASKIN1 SNORD60 LOC106660606 DNASE1L2 PDPK1 CEMP1 MIR3180-5 TBC1D24 MLST8 LOC652276 MIR1225 RNPS1 LOC729652 CCNF E4F1 ABCA17P MIR3178 ECI1 NTN3 TSC2 BRICD5 MIR6767 SNHG19 RAB26 MIR6768 AMDHD2 MIR4516 ABCA3 MIR940 MIR3677 TRAF7 PGP ATP6V0C MIR4717 LOC105371049 PKD1 MIR6511B1
nsv457351 Chr.16:2156590 - 2274302 on Build GRCh38 Loss BRICD5 CASKIN1 MLST8 MIR3677 TRAF7 LOC106660606 PGP DNASE1L2 RNPS1 E4F1 MIR940 ECI1
nsv952902 Chr.16:2143400 - 2339999 on Build GRCh38 Deletion BRICD5 CASKIN1 SNORD60 LOC106660606 SNHG19 RAB26 DNASE1L2 ABCA3 MIR940 MLST8 MIR3677 TRAF7 PGP MIR4717 RNPS1 E4F1 ECI1

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More Information


Set Membership:

 Intragenic Non-exonic DGV Variation

Panther Classification:

Molecular Function -

scaffold/adaptor protein

Gene Ontology Categories:

Function(s) Process(es)


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