Name: [Hs02356994_cn] [AMACR]
Creator: Thermo Fisher Scientific
Keywords: [AMACR] Assay, [alpha-methylacyl-CoA racemase] Assay

Genomic Map

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Assay Details

Entrez Gene ID:	23600
Gene Name:	alpha-methylacyl-CoA racemase
Gene Aliases:	AMACRD, CBAS4, RACE, RM
Location:	Chr.5:33986986-34008115 on Build GRCh38
Assay Gene Location:	Within Exon 4

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
AMACR	NM_001167595.1	4	745	NP_001161067.1
	NM_014324.5	4	745	NP_055139.4
	NM_203382.2	3	584	NP_976316.1
	AF047020.1	4	737	AAD10205.1
	AF158378.1	4	714	AAF22610.1
	AJ130733.1	4	737	CAB44062.1
	AK000912.1	4	730
	AK022765.1	4	715
	AK222831.1	4	717	BAD96551.1
	AK225749.1	4	754
	AK292988.1	3	534
	AL545355.3	4	658
	AL571115.3	2	886
	AY330488.1	3	497	AAQ67234.1
	AY330489.1	4	658	AAQ94259.1
	AY935981.1	4	658	AAY16192.1
	BC009471.1	3	500	AAH09471.1
	BG708726.1	3	520
	BQ941482.1	2	254
	BT007193.1	3	488	AAP35857.1
	EF560721.1	4	668
	FJ498906.1	3	500
	FJ498907.1	3	500
	FJ498908.1	3	500

Entrez Gene ID:	100534612
Gene Name:	C1QTNF3-AMACR readthrough (NMD candidate)
Gene Aliases:	-
Location:	Chr.5:33986986-34124528 on Build GRCh38
Assay Gene Location:	Within Exon 8

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
C1QTNF3-AMACR	NR_037951.1	8	1005
C1QTNF3-AMACR	AB209261.1	8	1014	BAD92498.1

Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
esv3604666	Chr.5:33947465 - 34004885 on Build GRCh38	Gain	SLC45A2 AMACR C1QTNF3-AMACR
nsv830255	Chr.5:33929507 - 34109160 on Build GRCh38	Loss	SLC45A2 C1QTNF3 RXFP3 AMACR C1QTNF3-AMACR
nsv519240	Chr.5:33950598 - 34749311 on Build GRCh38	Gain	LOC646652 SLC45A2 C1QTNF3 RAI14 AMACR LOC105374753 C1QTNF3-AMACR
nsv522715	Chr.5:33319157 - 34037875 on Build GRCh38	Gain	SLC45A2 C1QTNF3 RXFP3 ADAMTS12 AMACR C1QTNF3-AMACR TARS