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Gene Symbol
B3GNTL1
Assay Reference Genome
Location

Chr.17:82942463 on build GRCh38
Cytoband
17q25.3
Assay ID Hs02365238_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 146712

Gene Name:

 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase-like 1

Gene Aliases:

 3-Gn-T8, B3GNT8, BGnT-8, beta-1, beta3Gn-T8, beta3GnTL1

Location:

 Chr.17:82942149-83051845 on Build GRCh38

Assay Gene Location:

 Within Exon 20
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
B3GNTL1 NM_001009905.2 13 2711 NP_001009905.1
NM_001320742.1 14 2829 NP_001307671.1
NM_001320743.1 9 3306 NP_001307672.1
NR_135465.1 14 3066
NR_135466.1 10 2138
AA764879.1
AK054757.1 10 2138
BU623325.1 1 325

Target Gene Details

Entrez Gene ID:

 6904

Gene Name:

 tubulin folding cofactor D

Gene Aliases:

 SSD-1, tfcD

Location:

 Chr.17:82752048-82943186 on Build GRCh38

Assay Gene Location:

 Overlaps Intron 55 - Exon 56
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
TBCD NM_005993.4 NP_005984.3
XM_005256396.4 XP_005256453.1
XM_005256399.4 XP_005256456.1
XM_005256404.4 XP_005256461.1
XM_006722290.2 XP_006722353.1
XM_006722291.3 XP_006722354.1
XM_006722292.2 XP_006722355.1
XM_011523589.1 XP_011521891.1
XM_011523590.1 XP_011521892.1
XM_011523591.1 XP_011521893.1
XM_011523593.1 XP_011521895.1
XM_011523594.1 XP_011521896.1
XM_011523595.2 XP_011521897.1
XM_011523597.2 XP_011521899.1
XM_011523598.1 XP_011521900.1
XM_011523599.2 XP_011521901.1
XM_011523600.2 XP_011521902.1
XM_017024987.1 XP_016880476.1
XM_017024989.1 XP_016880478.1
XM_017024990.1 XP_016880479.1
AA421669.1
AB023205.1
AF193042.1 AAG22470.1
AJ006417.1 CAA07022.1
AK057975.1
AK091959.1 BAC03777.1
AK129619.1 2 1141 BAC85197.1
AL133562.1 CAB63716.1
BC003094.1 AAH03094.1
BC012824.2 AAH12824.2
BC039654.1 AAH39654.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv1067553 Chr.17:82530808 - 83091923 on Build GRCh38 Loss FN3K LOC105376791 WDR45B LOC105371944 METRNL RAB40B FN3KRP LOC101929552 ZNF750 MIR4525 FOXK2 TBCD B3GNTL1
dgv3296n100 Chr.17:82851564 - 83091923 on Build GRCh38 Gain LOC105371944 METRNL TBCD B3GNTL1
nsv428351 Chr.17:81152631 - 83064073 on Build GRCh38 Gain P4HB CD7 GCGR MIR4740 SLC38A10 SNORD134 ZNF750 PPP1R27 AATK-AS1 TSPAN10 MRPL12 CSNK1D MCRIP1 HEXDC LOC105376791 MIR6786 CCDC57 OXLD1 HGS SIRT7 C17orf62 CEP131 DCXR MIR4525 CCDC137 PCYT2 TMEM105 FOXK2 PYCR1 MAFG FN3K C17orf89 OGFOD3 NOTUM FASN LOC105376790 ANAPC11 STRA13 LRRC45 ARHGDIA RFNG NPLOC4 GPS1 ARL16 NPB BAHCC1 SLC25A10 LINC00482 ASPSCR1 LOC101929511 ACTG1 UTS2R TBCD MAFG-AS1 B3GNTL1 SECTM1 ALYREF TEX19 WDR45B LOC105371944 PDE6G RAC3 RAB40B MYADML2 FN3KRP MIR6787 LOC105371925 LOC101929552 SLC16A3 NARF AATK MIR3186 FAAP100 DUS1L FSCN2 TEPSIN LOC100130370
nsv576217 Chr.17:82937869 - 82960820 on Build GRCh38 Loss LOC105371944 TBCD B3GNTL1
dgv3297n100 Chr.17:82879855 - 83048753 on Build GRCh38 Gain LOC105371944 TBCD B3GNTL1
nsv1057153 Chr.17:82876571 - 83091923 on Build GRCh38 Loss LOC105371944 METRNL TBCD B3GNTL1
esv3893052 Chr.17:82895301 - 83102003 on Build GRCh38 Gain LOC105371944 METRNL TBCD B3GNTL1
esv21913 Chr.17:81828123 - 83103548 on Build GRCh38 Gain+Loss P4HB METRNL CD7 SNORD134 ZNF750 PPP1R27 CSNK1D MCRIP1 HEXDC LOC105376791 CCDC57 SIRT7 C17orf62 DCXR MIR4525 PCYT2 FOXK2 PYCR1 MAFG FN3K OGFOD3 NOTUM FASN LOC105376790 ANAPC11 STRA13 LRRC45 ARHGDIA RFNG GPS1 NPB ASPSCR1 LOC101929511 UTS2R TBCD MAFG-AS1 B3GNTL1 SECTM1 ALYREF TEX19 WDR45B LOC105371944 RAC3 RAB40B MYADML2 FN3KRP MIR6787 LOC101929552 SLC16A3 NARF DUS1L

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