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Gene Symbol
B3GNTL1
Assay Reference Genome
Location

Chr.17:82942463 on build GRCh38
Cytoband
17q25.3
Assay ID Hs02365238_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 146712

Gene Name:

 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase-like 1

Gene Aliases:

 3-Gn-T8, B3GNT8, BGnT-8, beta-1, beta3Gn-T8, beta3GnTL1

Location:

 Chr.17:82942149-83051845 on Build GRCh38

Assay Gene Location:

 Within Exon 20
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
B3GNTL1 NM_001009905.2 13 2711 NP_001009905.1
NM_001320742.1 14 2829 NP_001307671.1
NM_001320743.1 9 3306 NP_001307672.1
NR_135465.1 14 3066
NR_135466.1 10 2138
AA764879.1
AK054757.1 10 2138
BU623325.1 1 325

Target Gene Details

Entrez Gene ID:

 6904

Gene Name:

 tubulin folding cofactor D

Gene Aliases:

 SSD-1, tfcD

Location:

 Chr.17:82752048-82943186 on Build GRCh38

Assay Gene Location:

 Overlaps Intron 55 - Exon 56
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
TBCD NM_005993.4 NP_005984.3
XM_005256396.4 XP_005256453.1
XM_005256399.4 XP_005256456.1
XM_005256404.4 XP_005256461.1
XM_006722290.2 XP_006722353.1
XM_006722291.3 XP_006722354.1
XM_006722292.2 XP_006722355.1
XM_011523589.1 XP_011521891.1
XM_011523590.1 XP_011521892.1
XM_011523591.1 XP_011521893.1
XM_011523593.1 XP_011521895.1
XM_011523594.1 XP_011521896.1
XM_011523595.2 XP_011521897.1
XM_011523597.2 XP_011521899.1
XM_011523598.1 XP_011521900.1
XM_011523599.2 XP_011521901.1
XM_011523600.2 XP_011521902.1
XM_017024987.1 XP_016880476.1
XM_017024989.1 XP_016880478.1
XM_017024990.1 XP_016880479.1
AA421669.1
AB023205.1
AF193042.1 AAG22470.1
AJ006417.1 CAA07022.1
AK057975.1
AK091959.1 BAC03777.1
AK129619.1 2 1141 BAC85197.1
AL133562.1 CAB63716.1
BC003094.1 AAH03094.1
BC012824.2 AAH12824.2
BC039654.1 AAH39654.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv1067553 Chr.17:82530808 - 83091923 on Build GRCh38 Loss FN3K TBCD FN3KRP B3GNTL1 MIR4525 WDR45B METRNL RAB40B LOC105376791 FOXK2 ZNF750 LOC105371944 LOC101929552
dgv3296n100 Chr.17:82851564 - 83091923 on Build GRCh38 Gain METRNL TBCD B3GNTL1 LOC105371944
nsv428351 Chr.17:81152631 - 83064073 on Build GRCh38 Gain FN3K TBCD SLC16A3 RAC3 HGS FN3KRP MRPL12 ARHGDIA NPLOC4 TEX19 RAB40B LOC105376791 HEXDC STRA13 AATK-AS1 ALYREF UTS2R DUS1L LOC101929511 NPB PCYT2 LOC105376790 ARL16 SIRT7 GPS1 ACTG1 MCRIP1 ASPSCR1 CCDC57 OXLD1 CSNK1D FSCN2 LINC00482 PPP1R27 ZNF750 SECTM1 LOC101929552 CEP131 MIR4740 B3GNTL1 CCDC137 DCXR AATK MIR6787 MIR6786 MIR4525 C17orf89 NARF FASN LRRC45 MAFG-AS1 WDR45B ANAPC11 P4HB SLC25A10 C17orf62 FAAP100 PYCR1 FOXK2 MIR3186 LOC105371944 TMEM105 GCGR RFNG PDE6G LOC105371925 CD7 MYADML2 SNORD134 NOTUM TSPAN10 BAHCC1 MAFG TEPSIN OGFOD3 LOC100130370 SLC38A10
nsv576217 Chr.17:82937869 - 82960820 on Build GRCh38 Loss TBCD B3GNTL1 LOC105371944
dgv3297n100 Chr.17:82879855 - 83048753 on Build GRCh38 Gain TBCD B3GNTL1 LOC105371944
esv3893052 Chr.17:82895301 - 83102003 on Build GRCh38 Gain METRNL TBCD B3GNTL1 LOC105371944
nsv1057153 Chr.17:82876571 - 83091923 on Build GRCh38 Loss METRNL TBCD B3GNTL1 LOC105371944
esv21913 Chr.17:81828123 - 83103548 on Build GRCh38 Gain+Loss FN3K TBCD SLC16A3 RAC3 FN3KRP ARHGDIA TEX19 RAB40B LOC105376791 HEXDC STRA13 ALYREF UTS2R DUS1L LOC101929511 NPB PCYT2 LOC105376790 SIRT7 GPS1 MCRIP1 ASPSCR1 CCDC57 CSNK1D PPP1R27 ZNF750 SECTM1 LOC101929552 B3GNTL1 DCXR MIR6787 MIR4525 NARF FASN LRRC45 MAFG-AS1 WDR45B METRNL ANAPC11 P4HB C17orf62 PYCR1 FOXK2 LOC105371944 RFNG CD7 MYADML2 SNORD134 NOTUM MAFG OGFOD3

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