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See other TRAF7 CNV Assays ›
Gene Symbol
TRAF7
Assay Reference Genome
Location

Chr.16:2174274 on build GRCh38
Cytoband
16p13.3
Assay ID Hs02390279_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 84231

Gene Name:

 TNF receptor associated factor 7

Gene Aliases:

 RFWD1, RNF119

Location:

 Chr.16:2155752-2178129 on Build GRCh38

Assay Gene Location:

 Overlaps Intron 13 - Exon 14
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
TRAF7 NM_032271.2 NP_115647.2
XM_005255627.4 XP_005255684.1
XM_011522700.1 XP_011521002.1
AK090624.1
AL136921.1 CAB66855.1
AY569455.1 AAS68363.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
esv2422427 Chr.16:10001 - 2723164 on Build GRCh38 Duplication SNRNP25 PDIA2 HBQ1 RPL3L C1QTNF8 MIR4516 CASKIN1 HBM STUB1 LINC00254 DDX11L10 NPW MAPK8IP3 LMF1-AS1 ERVK13-1 NARFL MLST8 FAM173A WASIR2 NME3 TPSAB1 SNHG19 CAPN15 MSRB1 TPSG1 LINC00235 GNPTG RNF151 MIR940 NDUFB10 PIGQ IGFALS MPG SOX8 MIR662 MIR6859-4 LOC105371045 MIR4717 PTX4 PRSS29P NPRL3 PRR25 NUBP2 PGP RNPS1 LOC107984876 MIR3180-5 CRAMP1 TSC2 CLCN7 SNORA10 SYNGR3 SNORD60 C16orf91 RPS2 SSTR5 ZNF598 RHBDF1 NTN3 UNKL RHOT2 PDPK1 AMDHD2 MIR3176 TSR3 WFIKKN1 FLJ42627 MRPS34 CCDC78 METTL26 CCNF LOC729652 LMF1 LOC105371038 SNORA78 FAHD1 DECR2 MRPL28 PRR35 MIR3178 AXIN1 POLR3K TPSB2 RGS11 HAGH SPSB3 RAB40C SSTR5-AS1 TELO2 JMJD8 LOC105371046 LOC106660606 TMEM204 NHLRC4 LOC105371184 UBE2I TBL3 C16orf59 BRICD5 MIR6768 HBA2 MIR5587 TBC1D24 RPL23AP5 MIR3177 MIR3677 LOC107987233 MIR1225 NTHL1 TPSD1 RPUSD1 WDR90 KCTD5 ABCA3 PKD1 MIR6511B1 CACNA1H WDR24 BAIAP3 SNHG9 ECI1 SNORA64 NOXO1 GFER IFT140 TRAF7 LUC7L HBA1 GNG13 CEMP1 ARHGDIG HN1L E4F1 RAB26 DNASE1L2 RHBDL1 ATP6V0C EME2 HS3ST6 TMEM8A MCRIP2 MIR6767 ABCA17P PRSS27 SLC9A3R2 HBZ NME4 FAM234A CHTF18 LOC105371049 LOC652276 LOC101929280 FBXL16 LOC105371047 MEIOB MSLN CCDC154 RAB11FIP3 METRN HAGHL LOC100134368 LOC100287175
dgv4859n54 Chr.16:1971892 - 2264400 on Build GRCh38 Loss ECI1 NOXO1 MIR4516 GFER CASKIN1 TRAF7 NPW PGP RNPS1 E4F1 MIR3180-5 RAB26 MLST8 DNASE1L2 TSC2 TBL3 BRICD5 SYNGR3 SNHG19 SNORD60 ZNF598 SLC9A3R2 MIR1225 NTHL1 LOC105371049 PKD1 MIR6511B1
dgv4861n54 Chr.16:2083900 - 2246850 on Build GRCh38 Loss ECI1 MIR4516 CASKIN1 TRAF7 MIR1225 PGP LOC105371049 E4F1 PKD1 MIR3180-5 MIR6511B1 RAB26 MLST8 DNASE1L2 TSC2 BRICD5 SNHG19 SNORD60
dgv4863n54 Chr.16:2141733 - 2274302 on Build GRCh38 Loss MIR3677 ECI1 CASKIN1 TRAF7 MIR940 PGP RNPS1 LOC106660606 E4F1 RAB26 MLST8 DNASE1L2 BRICD5 SNHG19 SNORD60
nsv571190 Chr.16:2055054 - 2200730 on Build GRCh38 Loss PKD1 MIR3180-5 MIR4516 MIR6511B1 RAB26 CASKIN1 TRAF7 TSC2 MIR1225 SNHG19 SNORD60 LOC105371049
nsv1052260 Chr.16:2074546 - 2629655 on Build GRCh38 Gain MIR4717 ECI1 MIR4516 CASKIN1 TRAF7 MIR3178 PGP RNPS1 CEMP1 LOC106660606 E4F1 MIR3180-5 RAB26 MLST8 DNASE1L2 TSC2 C16orf59 BRICD5 SNHG19 MIR6768 ATP6V0C SNORD60 TBC1D24 MIR3677 MIR6767 ABCA17P NTN3 MIR1225 MIR940 LOC105371049 LOC652276 PDPK1 ABCA3 AMDHD2 PKD1 MIR6511B1 CCNF LOC729652
nsv457351 Chr.16:2156590 - 2274302 on Build GRCh38 Loss MIR3677 ECI1 LOC106660606 E4F1 CASKIN1 MLST8 TRAF7 DNASE1L2 MIR940 BRICD5 PGP RNPS1
nsv952902 Chr.16:2143400 - 2339999 on Build GRCh38 Deletion MIR3677 MIR4717 ECI1 CASKIN1 TRAF7 MIR940 PGP RNPS1 ABCA3 LOC106660606 E4F1 RAB26 MLST8 DNASE1L2 BRICD5 SNHG19 SNORD60

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