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See other KLF16 CNV Assays ›
Gene Symbol
KLF16
Assay Reference Genome
Location

Chr.19:1854250 on build GRCh38
Cytoband
19p13.3
Assay ID Hs02412873_cn
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Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 83855

Gene Name:

 Kruppel like factor 16

Gene Aliases:

 BTEB4, DRRF, NSLP2

Location:

 Chr.19:1852399-1863565 on Build GRCh38

Assay Gene Location:

 Within Exon 2
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
KLF16 NM_031918.3 2 1036 NP_114124.1
AF327440.1 AAK15698.1
AK025941.1
CV809534.1 2 570

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
esv3893156 Chr.19:1766738 - 2115791 on Build GRCh38 Loss CSNK1G2-AS1 IZUMO4 SCAMP4 ABHD17A ADAT3 MOB3A KLF16 BTBD2 ATP8B3 REXO1 CSNK1G2 MIR1909 AP3D1 ONECUT3 MKNK2 LOC100288123
esv2669985 Chr.19:1852046 - 1864993 on Build GRCh38 Deletion KLF16
esv32942 Chr.19:1320268 - 1999205 on Build GRCh38 Gain+Loss SCAMP4 ADAT3 BTBD2 MUM1 REXO1 NDUFS7 CSNK1G2 C19orf25 RPS15 DAZAP1 LOC100288123 CSNK1G2-AS1 GAMT MEX3D ABHD17A REEP6 KLF16 ADAMTSL5 MBD3 ATP8B3 MIR1909 ONECUT3 PLK5 APC2 TCF3 UQCR11 PCSK4
nsv470107 Chr.19:1782799 - 2100347 on Build GRCh38 Loss CSNK1G2-AS1 IZUMO4 SCAMP4 ABHD17A ADAT3 MOB3A KLF16 BTBD2 ATP8B3 REXO1 CSNK1G2 MIR1909 MKNK2 LOC100288123
nsv1160560 Chr.19:1791100 - 1916393 on Build GRCh38 Deletion REXO1 SCAMP4 MIR1909 ABHD17A ADAT3 KLF16 ATP8B3 LOC100288123
nsv578338 Chr.19:1847699 - 1869095 on Build GRCh38 Loss REXO1 KLF16
nsv578337 Chr.19:1808864 - 1904613 on Build GRCh38 Gain REXO1 MIR1909 ABHD17A KLF16 ATP8B3 LOC100288123
nsv953942 Chr.19:1371602 - 2057401 on Build GRCh38 Deletion SCAMP4 ADAT3 BTBD2 MUM1 REXO1 NDUFS7 CSNK1G2 MKNK2 C19orf25 RPS15 DAZAP1 LOC100288123 CSNK1G2-AS1 GAMT MEX3D ABHD17A REEP6 KLF16 ADAMTSL5 MBD3 ATP8B3 MIR1909 ONECUT3 PLK5 APC2 TCF3 UQCR11 PCSK4

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More Information


Additional Information:

For this assay, SNP(s) [rs149080927] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Set Membership:

 Intragenic Exonic DGV Variation

Panther Classification:

Gene Ontology Categories:

Function(s) Process(es)


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