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See other DHX16 CNV Assays ›
Gene Symbol
DHX16
Assay Reference Genome
Location

Chr.6:30671062 on build GRCh38
Cytoband
6p21.33
Assay ID Hs02417772_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 8449

Gene Name:

 DEAH-box helicase 16

Gene Aliases:

 DBP2, DDX16, PRO2014, PRP8, PRPF2, Prp2

Location:

 Chr.6:30653119-30673053 on Build GRCh38

Assay Gene Location:

 Overlaps Intron 2 - Exon 2
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
DHX16 NM_001164239.1 NP_001157711.1
NM_003587.4 NP_003578.2
XM_011514940.2 XP_011513242.1
AB001601.1 BAA25908.1
AK302721.1
AK312264.1
BC002789.2 AAH02789.1
BC008825.2 AAH08825.1
BC009392.2 AAH09392.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv830626 Chr.6:30590287 - 30765128 on Build GRCh38 Loss ATAT1 ABCF1 MRPS18B MDC1-AS1 PPP1R18 C6orf136 NRM TUBB FLOT1 PPP1R10 HCG20 DHX16 MDC1 IER3
nsv1074389 Chr.6:29116522 - 31446623 on Build GRCh38 Deletion MUC21 TRIM39-RPP21 HLA-A HLA-B ZFP57 MAS1L MRPS18B TRIM31-AS1 TRIM26 C6orf136 OR14J1 FLOT1 OR2J2 PPP1R10 OR10C1 HCG20 MIR6891 HCG9 HLA-G HLA-H DHX16 LINC01015 HLA-F-AS1 OR12D2 CCHCR1 GNL1 PRR3 PPP1R11 ZNRD1ASP ABCF1 MICA OR2H2 ZNRD1 HCG17 HLA-K MDC1-AS1 HCG4 NRM LOC101929006 TRIM31 MOG DPCR1 PSORS1C3 UBD MIR4640 OR5V1 TRIM15 IER3 TRIM39 VARS2 SNORD32B HCG8 HCG22 HCG4B MUC22 C6orf15 POU5F1 PPP1R18 TRIM40 HLA-E HCG18 GABBR1 HLA-F SFTA2 IFITM4P GTF2H4 CDSN MDC1 RNF39 LOC105375014 MIR877 ATAT1 TCF19 TRIM10 PSORS1C2 OR12D3 HLA-C PSORS1C1 OR11A1 HCG27 TUBB RPP21 LINC00243 LOC554223 OR2H1 HLA-J DDR1 HLA-L
nsv601481 Chr.6:30454855 - 31316476 on Build GRCh38 Loss MUC21 VARS2 HCG22 MUC22 C6orf15 POU5F1 MRPS18B PPP1R18 C6orf136 HLA-E FLOT1 PPP1R10 SFTA2 HCG20 GTF2H4 CDSN DHX16 MDC1 LOC105375014 MIR877 CCHCR1 ATAT1 GNL1 PRR3 ABCF1 TCF19 PSORS1C2 HLA-C MDC1-AS1 PSORS1C1 HCG27 NRM TUBB LINC00243 DPCR1 PSORS1C3 MIR4640 DDR1 IER3
nsv1122126 Chr.6:28628023 - 31244023 on Build GRCh38 Deletion MUC21 TRIM39-RPP21 HLA-A OR2J3 ZFP57 MAS1L MRPS18B TRIM31-AS1 TRIM26 C6orf136 OR14J1 FLOT1 OR2J2 PPP1R10 OR10C1 HCG20 HCG9 HLA-G HLA-H DHX16 LINC01015 HLA-F-AS1 OR12D2 CCHCR1 OR2B3 GNL1 PRR3 PPP1R11 ZNRD1ASP ABCF1 ZNF311 OR2H2 ZNRD1 HCG16 HCG17 HLA-K MDC1-AS1 HCG4 NRM LOC101929006 TRIM31 OR2W1 MOG LINC01623 DPCR1 PSORS1C3 UBD MIR4640 OR5V1 LINC00533 TRIM15 IER3 TRIM39 TRIM27 VARS2 SNORD32B HCG8 HCG22 HCG4B LINC01556 MUC22 HCG14 C6orf15 POU5F1 PPP1R18 TRIM40 HLA-E HCG18 GABBR1 HLA-F SFTA2 IFITM4P LOC100129636 GTF2H4 CDSN MDC1 RNF39 LOC105375014 MIR877 ATAT1 TCF19 TRIM10 PSORS1C2 OR12D3 PSORS1C1 OR11A1 HCG27 TUBB RPP21 LINC00243 LOC554223 OR2H1 HLA-J DDR1 HLA-L
nsv1144137 Chr.6:29720323 - 31338123 on Build GRCh38 Deletion MUC21 TRIM39-RPP21 HLA-A MRPS18B TRIM31-AS1 TRIM26 C6orf136 FLOT1 PPP1R10 HCG20 HCG9 HLA-G HLA-H DHX16 HLA-F-AS1 CCHCR1 GNL1 PRR3 PPP1R11 ZNRD1ASP ABCF1 ZNRD1 HCG17 HLA-K MDC1-AS1 HCG4 NRM TRIM31 DPCR1 PSORS1C3 MIR4640 TRIM15 IER3 TRIM39 VARS2 HCG8 HCG22 HCG4B MUC22 C6orf15 POU5F1 PPP1R18 TRIM40 HLA-E HCG18 HLA-F SFTA2 IFITM4P GTF2H4 CDSN MDC1 RNF39 LOC105375014 MIR877 ATAT1 TCF19 TRIM10 PSORS1C2 HLA-C PSORS1C1 HCG27 TUBB RPP21 LINC00243 LOC554223 HLA-J DDR1 HLA-L
nsv823472 Chr.6:30670804 - 30676441 on Build GRCh38 Gain PPP1R18 DHX16
nsv601264 Chr.6:29883666 - 31320716 on Build GRCh38 Loss MUC21 TRIM39-RPP21 HLA-A MRPS18B TRIM31-AS1 TRIM26 C6orf136 FLOT1 PPP1R10 HCG20 HCG9 HLA-H DHX16 CCHCR1 GNL1 PRR3 PPP1R11 ZNRD1ASP ABCF1 ZNRD1 HCG17 HLA-K MDC1-AS1 NRM TRIM31 DPCR1 PSORS1C3 MIR4640 TRIM15 IER3 TRIM39 VARS2 HCG8 HCG22 HCG4B MUC22 C6orf15 POU5F1 PPP1R18 TRIM40 HLA-E HCG18 SFTA2 GTF2H4 CDSN MDC1 RNF39 LOC105375014 MIR877 ATAT1 TCF19 TRIM10 PSORS1C2 HLA-C PSORS1C1 HCG27 TUBB RPP21 LINC00243 HLA-J DDR1 HLA-L
esv2731791 Chr.6:30404802 - 31346410 on Build GRCh38 Deletion MUC21 VARS2 HCG22 MUC22 C6orf15 POU5F1 MRPS18B PPP1R18 C6orf136 HLA-E FLOT1 PPP1R10 SFTA2 HCG20 GTF2H4 CDSN DHX16 MDC1 LOC105375014 MIR877 CCHCR1 ATAT1 GNL1 PRR3 ABCF1 TCF19 PSORS1C2 HLA-C MDC1-AS1 PSORS1C1 HCG27 NRM TUBB LINC00243 DPCR1 PSORS1C3 MIR4640 DDR1 IER3
esv2670269 Chr.6:30498650 - 31067145 on Build GRCh38 Deletion MUC21 VARS2 HCG22 MUC22 MRPS18B PPP1R18 C6orf136 FLOT1 PPP1R10 SFTA2 HCG20 GTF2H4 DHX16 MDC1 LOC105375014 MIR877 ATAT1 GNL1 PRR3 ABCF1 MDC1-AS1 NRM TUBB LINC00243 DPCR1 MIR4640 DDR1 IER3
esv3411275 Chr.6:29981607 - 31490616 on Build GRCh38 Duplication MUC21 TRIM39-RPP21 HLA-B MRPS18B TRIM31-AS1 TRIM26 C6orf136 FLOT1 PPP1R10 HCG20 MIR6891 DHX16 CCHCR1 GNL1 PRR3 PPP1R11 ZNRD1ASP ABCF1 MICA ZNRD1 HCG17 MDC1-AS1 HCP5 NRM TRIM31 DPCR1 PSORS1C3 MIR4640 TRIM15 IER3 TRIM39 VARS2 HCG8 HCG22 MUC22 C6orf15 POU5F1 PPP1R18 TRIM40 HLA-E HCG18 SFTA2 LOC102725068 GTF2H4 CDSN MDC1 HCG26 RNF39 LOC105375014 MIR877 ATAT1 TCF19 TRIM10 PSORS1C2 HLA-C PSORS1C1 HCG27 TUBB RPP21 LINC00243 HLA-J DDR1 HLA-L

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More Information


Set Membership:

 Intragenic Non-exonic DGV Variation

Panther Classification:

Molecular Function -

RNA helicase

Gene Ontology Categories:

Function(s) Process(es)


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