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See other LIG1 CNV Assays ›
Gene Symbol
LIG1
Assay Reference Genome
Location

Chr.19:48133023 on build GRCh38
Cytoband
19q13.33
Assay ID Hs02419685_cn
Size
Availability Made To Order
Catalog # 4400291
Price 475.00
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Assay Details

Target Gene Details

Entrez Gene ID:

 3978

Gene Name:

 DNA ligase 1

Gene Aliases:

 -

Location:

 Chr.19:48115445-48170603 on Build GRCh38

Assay Gene Location:

 Within Exon 19
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
LIG1 NM_000234.2 18 2104 NP_000225.1
NM_001289063.1 17 2011 NP_001275992.1
NM_001289064.1 16 1900 NP_001275993.1
NM_001320970.1 18 2101 NP_001307899.1
NM_001320971.1 17 2014 NP_001307900.1
NR_110296.1 18 2101
NR_135497.1 18 2104
NR_135498.1 16 1933
NR_135499.1 17 2014
NR_135500.1 18 2281
NR_135501.1 16 1925
XM_017026809.1 16 1633 XP_016882298.1
AB208791.1 18 1824 BAD92028.1
AK225863.1
AK297296.1 16 1611
AK300370.1 17 1752
AK300607.1 13 1440
AK314210.1 18 1811
BC108318.1 18 2104 AAI08319.1
BC110622.2 17 1753 AAI10623.1
M36067.1 18 1804 AAA59518.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv833853 Chr.19:47982539 - 48184317 on Build GRCh38 Loss PLA2G4C PLA2G4C-AS1 ELSPBP1 CABP5 LIG1 BSPH1 C19orf68
nsv9739 Chr.19:47901840 - 50143063 on Build GRCh38 Gain+Loss RRAS SCAF1 KCNJ14 FUT1 MIR4324 BCL2L12 MIR4750 SNAR-C3 SNAR-C4 IZUMO1 LOC101928295 PLA2G4C FGF21 SULT2B1 SNAR-A9 KCNA7 PRRG2 NTF4 SYNGR4 DBP FTL SNORD32A NUCB1 C19orf68 ALDH16A1 PLA2G4C-AS1 SNORD35A SNRNP70 SNAR-G2 CGB3 KDELR1 HSD17B14 PLEKHA4 CYTH2 SNAR-B2 RCN3 RPL18 RUVBL2 SNORD33 SNAR-C1 NOSIP LIN7B PTH2 SNAR-A3 MIR5088 SNORD35B PPP1R15A MIR6798 BAX SLC6A16 SPACA4 GYS1 MED25 SNAR-C2 LOC101059948 SNAR-A4 PTOV1-AS2 BSPH1 VRK3 BCAT2 SIGLEC11 CCDC155 IRF3 LOC105447645 GRIN2D DHDH TEAD2 GRWD1 CA11 SNAR-A6 FLT3LG AKT1S1 DKKL1 ATF5 SNORD34 SNAR-A8 PRMT1 SIGLEC16 SNAR-A14 CCDC114 C19orf73 SNAR-A13 SNAR-C5 NUP62 CGB7 NUCB1-AS1 ELSPBP1 FUT2 FUZ CD37 SEC1P TMEM143 TRPM4 MIR6799 MIR6800 PPFIA3 SNAR-A1 FCGRT SNAR-G1 FLJ26850 SNAR-A5 SNAR-A10 PIH1D1 LOC100287477 CARD8-AS1 PNKP PTOV1-AS1 GFY RASIP1 PTOV1 CARD8 TSKS LIG1 PRR12 TULP2 EMP3 TBC1D17 RPL13A NTN5 SNAR-A11 MIR4751 ZNF114 SPHK2 HRC LHB MIR150 SNAR-A12 MAMSTR CABP5 FAM83E CPT1C ZNF473 LMTK3 MIR4749 ADM5 CGB1 SLC17A7 CGB2 CGB5 CGB8 RPS11 AP2A1 SNAR-A7 SNAR-A2 LOC105372430 IL4I1 SNAR-D SNAR-B1
esv34181 Chr.19:48009377 - 48416682 on Build GRCh38 Loss EMP3 CARD8-AS1 GRIN2D ZNF114 C19orf68 PLA2G4C PLA2G4C-AS1 ELSPBP1 CARD8 CABP5 TMEM143 SYNGR4 KDELR1 LIG1 CCDC114
nsv953596 Chr.19:48120744 - 48134943 on Build GRCh38 Deletion LIG1

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