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Gene Symbol
GPSM3
Assay Reference Genome
Location

Chr.6:32191211 on build GRCh38
Cytoband
6p21.32
Assay ID Hs02423746_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 63940

Gene Name:

 G-protein signaling modulator 3

Gene Aliases:

 AGS4, C6orf9, G18, G18.1a, G18.1b, G18.2, NG1

Location:

 Chr.6:32190766-32195523 on Build GRCh38

Assay Gene Location:

 Within Exon 8
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
GPSM3 NM_001276501.1 4 1040 NP_001263430.1
NM_022107.2 8 1011 NP_071390.1
AF155657.1 4 659 AAF67476.1
AJ243937.1 8 1011 CAB51287.1
BC018724.1 4 703 AAH18724.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv830629 Chr.6:32076201 - 32222010 on Build GRCh38 Loss EGFL8 AGPAT1 TNXB LOC100507547 NOTCH4 MIR6833 PBX2 MIR6721 PPT2-EGFL8 AGER PRRT1 ATF6B PPT2 GPSM3 FKBPL RNF5
dgv10463n54 Chr.6:31817661 - 32683279 on Build GRCh38 Loss HLA-DRB1 EGFL8 AGPAT1 TNXB HLA-DRB6 LOC100507547 NELFE SNORD52 DXO HSPA1B CFB CYP21A2 MIR6833 C2 BTNL2 ZBTB12 TNXA HLA-DRB5 NEU1 STK19 EHMT2 HLA-DQA1 HSPA1A SKIV2L GPSM3 C2-AS1 HLA-DRA HCG23 NOTCH4 PBX2 SNORD48 PRRT1 CYP21A1P RNF5 C4B MIR1236 C6orf48 C4A C6orf10 MIR6721 HLA-DQB1 PPT2-EGFL8 HLA-DQB1-AS1 AGER ATF6B PPT2 FKBPL LOC101929163 SLC44A4
dgv10472n54 Chr.6:31985690 - 32812026 on Build GRCh38 Loss HLA-DRB1 EGFL8 AGPAT1 TNXB HLA-DRB6 HCG23 LOC100507547 NOTCH4 CYP21A2 MIR6833 HLA-DQB2 PBX2 PRRT1 CYP21A1P BTNL2 RNF5 TNXA HLA-DRB5 C4B C4A C6orf10 MIR6721 HLA-DQB1 MIR3135B HLA-DQA1 PPT2-EGFL8 HLA-DQB1-AS1 AGER HLA-DQA2 ATF6B PPT2 GPSM3 FKBPL LOC101929163 HLA-DRA
nsv602109 Chr.6:32190542 - 32193653 on Build GRCh38 Loss GPSM3
esv2759415 Chr.6:31903735 - 32241336 on Build GRCh38 Gain+Loss EGFL8 AGPAT1 TNXB LOC100507547 NOTCH4 NELFE DXO CFB CYP21A2 MIR6833 PBX2 C2 PRRT1 CYP21A1P RNF5 TNXA C4B MIR1236 C4A STK19 MIR6721 PPT2-EGFL8 AGER ATF6B PPT2 SKIV2L GPSM3 FKBPL C2-AS1
nsv1126749 Chr.6:31457323 - 32594423 on Build GRCh38 Deletion HLA-DRB1 EGFL8 AGPAT1 C6orf25 TNXB HLA-DRB6 MCCD1 LOC100507547 LTA LY6G6E SAPCD1 NELFE SNORD52 DXO HSPA1B CFB CYP21A2 MIR6833 VWA7 C2 LY6G5C BAG6 BTNL2 HCG26 ZBTB12 CLIC1 HSPA1L TNXA LY6G5B ATP6V1G2 LY6G6C LOC102725068 MIR6832 HLA-DRB5 ATP6V1G2-DDX39B SNORD84 DDX39B-AS1 NEU1 NFKBIL1 STK19 LTB AIF1 EHMT2 HSPA1A VARS CSNK2B SKIV2L GPSM3 C2-AS1 HLA-DRA GPANK1 MSH5 DDAH2 SAPCD1-AS1 HCG23 MIR4646 NOTCH4 LY6G6F PBX2 DDX39B SNORD48 PRRT1 CYP21A1P PRRC2A APOM LOC100287329 SNORA38 LSM2 RNF5 C4B MIR1236 C6orf48 TNF C4A ABHD16A C6orf47 C6orf10 MIR6721 LY6G6D MSH5-SAPCD1 NCR3 PPT2-EGFL8 AGER MICB ATF6B HCP5 PPT2 SNORD117 FKBPL LOC101929163 LST1 SLC44A4
nsv1073969 Chr.6:31456422 - 33480523 on Build GRCh38 Deletion EGFL8 HLA-DPA1 AGPAT1 C6orf25 ZBTB9 TNXB MCCD1 LOC100507547 LTA SAPCD1 SNORD52 DXO HLA-DPB1 RING1 CYP21A2 VWA7 C2 LY6G5C RGL2 BAG6 TAPBP HCG24 HCG26 CLIC1 TNXA LY6G5B LY6G6C MIR6832 SNORD84 HLA-DPB2 NEU1 PSMB9 EHMT2 HLA-DQA1 VARS HLA-DQA2 MIR6873 SKIV2L HCG25 SAPCD1-AS1 TAP2 MIR4646 TAP1 MIR5004 PBX2 DDX39B RXRB CUTA BRD2 PRRC2A APOM B3GALT4 PFDN6 MIR6834 MIR1236 C6orf48 TNF ABHD16A C6orf47 HLA-DQB1 LY6G6D MSH5-SAPCD1 NCR3 PPT2-EGFL8 HLA-DQB1-AS1 AGER ATF6B HCP5 PPT2 LOC101929163 SLC44A4 HLA-DMA HLA-DRB1 MIR219A1 HLA-DRB6 LY6G6E NELFE HLA-DMB HSPA1B CFB MIR6833 WDR46 SYNGAP1 BTNL2 ZBTB12 HSPA1L ATP6V1G2 LOC102725068 HLA-DRB5 PSMB8 ATP6V1G2-DDX39B DDX39B-AS1 NFKBIL1 STK19 LTB AIF1 COL11A2 HSPA1A KIFC1 RPS18 CSNK2B ZBTB22 GPSM3 C2-AS1 HLA-DRA GPANK1 MSH5 DDAH2 HCG23 PHF1 NOTCH4 LY6G6F HLA-DQB2 VPS52 SNORD48 PRRT1 CYP21A1P LOC100287329 HSD17B8 SNORA38 LSM2 PSMB8-AS1 RNF5 SLC39A7 DAXX PPP1R2P1 C4B HLA-DOB LOC100294145 C4A C6orf10 MIR6721 MIR3135B HLA-DOA MICB SNORD117 FKBPL LST1
nsv462877 Chr.6:32183666 - 32210123 on Build GRCh38 Loss AGER NOTCH4 GPSM3 PBX2
nsv602104 Chr.6:32096949 - 32203906 on Build GRCh38 Loss EGFL8 AGPAT1 TNXB LOC100507547 NOTCH4 MIR6833 PBX2 MIR6721 PPT2-EGFL8 AGER PRRT1 ATF6B PPT2 GPSM3 FKBPL RNF5
dgv10486n54 Chr.6:32187671 - 32193653 on Build GRCh38 Loss GPSM3 PBX2
nsv1112900 Chr.6:31455323 - 33480423 on Build GRCh38 Deletion EGFL8 HLA-DPA1 AGPAT1 C6orf25 ZBTB9 TNXB MCCD1 LOC100507547 LTA SAPCD1 SNORD52 DXO HLA-DPB1 RING1 CYP21A2 VWA7 C2 LY6G5C RGL2 BAG6 TAPBP HCG24 HCG26 CLIC1 TNXA LY6G5B LY6G6C MIR6832 SNORD84 HLA-DPB2 NEU1 PSMB9 EHMT2 HLA-DQA1 VARS HLA-DQA2 MIR6873 SKIV2L HCG25 SAPCD1-AS1 TAP2 MIR4646 TAP1 MIR5004 PBX2 DDX39B RXRB CUTA BRD2 PRRC2A APOM B3GALT4 PFDN6 MIR6834 MIR1236 C6orf48 TNF ABHD16A C6orf47 HLA-DQB1 LY6G6D MSH5-SAPCD1 NCR3 PPT2-EGFL8 HLA-DQB1-AS1 AGER ATF6B HCP5 PPT2 LOC101929163 SLC44A4 HLA-DMA HLA-DRB1 MIR219A1 HLA-DRB6 LY6G6E NELFE HLA-DMB HSPA1B CFB MIR6833 WDR46 SYNGAP1 BTNL2 ZBTB12 HSPA1L ATP6V1G2 LOC102725068 HLA-DRB5 PSMB8 ATP6V1G2-DDX39B DDX39B-AS1 NFKBIL1 STK19 LTB AIF1 COL11A2 HSPA1A KIFC1 RPS18 CSNK2B ZBTB22 GPSM3 C2-AS1 HLA-DRA GPANK1 MSH5 DDAH2 HCG23 PHF1 NOTCH4 LY6G6F HLA-DQB2 VPS52 SNORD48 PRRT1 CYP21A1P LOC100287329 HSD17B8 SNORA38 LSM2 PSMB8-AS1 RNF5 SLC39A7 DAXX PPP1R2P1 C4B HLA-DOB LOC100294145 C4A C6orf10 MIR6721 MIR3135B HLA-DOA MICB SNORD117 FKBPL LST1
dgv10404n54 Chr.6:31312550 - 32516591 on Build GRCh38 Loss EGFL8 AGPAT1 C6orf25 TNXB MCCD1 LOC100507547 LTA LY6G6E SAPCD1 NELFE SNORD52 DXO HSPA1B CFB CYP21A2 MIR6833 VWA7 C2 LY6G5C HLA-B BAG6 BTNL2 HCG26 ZBTB12 CLIC1 HSPA1L TNXA LY6G5B ATP6V1G2 LY6G6C LOC102725068 MIR6832 MICA ATP6V1G2-DDX39B SNORD84 DDX39B-AS1 NEU1 NFKBIL1 STK19 LTB AIF1 EHMT2 HSPA1A VARS CSNK2B SKIV2L GPSM3 C2-AS1 HLA-DRA GPANK1 MSH5 DDAH2 SAPCD1-AS1 HCG23 MIR4646 NOTCH4 LY6G6F PBX2 DDX39B SNORD48 PRRT1 CYP21A1P PRRC2A MIR6891 APOM LOC100287329 SNORA38 LSM2 RNF5 C4B MIR1236 C6orf48 TNF C4A ABHD16A C6orf47 C6orf10 MIR6721 LY6G6D MSH5-SAPCD1 NCR3 PPT2-EGFL8 AGER MICB ATF6B HCP5 PPT2 SNORD117 FKBPL LOC101929163 LST1 SLC44A4

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