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Gene Symbol
GPSM3
Assay Reference Genome
Location

Chr.6:32191211 on build GRCh38
Cytoband
6p21.32
Assay ID Hs02423746_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 63940

Gene Name:

 G-protein signaling modulator 3

Gene Aliases:

 AGS4, C6orf9, G18, G18.1a, G18.1b, G18.2, NG1

Location:

 Chr.6:32190766-32195523 on Build GRCh38

Assay Gene Location:

 Within Exon 8
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
GPSM3 NM_001276501.1 4 1040 NP_001263430.1
NM_022107.2 8 1011 NP_071390.1
AF155657.1 4 659 AAF67476.1
AJ243937.1 8 1011 CAB51287.1
BC018724.1 4 703 AAH18724.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv830629 Chr.6:32076201 - 32222010 on Build GRCh38 Loss PBX2 MIR6833 AGPAT1 MIR6721 TNXB PRRT1 GPSM3 NOTCH4 EGFL8 PPT2 AGER ATF6B PPT2-EGFL8 FKBPL LOC100507547 RNF5
nsv602109 Chr.6:32190542 - 32193653 on Build GRCh38 Loss GPSM3
dgv10472n54 Chr.6:31985690 - 32812026 on Build GRCh38 Loss HLA-DQB2 PBX2 HLA-DQB1 CYP21A1P MIR6833 HLA-DQB1-AS1 TNXB HLA-DRB5 PRRT1 C4A MIR3135B C6orf10 AGER ATF6B TNXA HLA-DRB6 CYP21A2 HLA-DQA1 LOC100507547 AGPAT1 BTNL2 HLA-DRA MIR6721 C4B GPSM3 NOTCH4 HCG23 EGFL8 LOC101929163 PPT2 PPT2-EGFL8 FKBPL HLA-DRB1 HLA-DQA2 RNF5
dgv10463n54 Chr.6:31817661 - 32683279 on Build GRCh38 Loss ZBTB12 CYP21A1P C6orf48 HLA-DQB1-AS1 HSPA1A SNORD52 PRRT1 NEU1 TNXA CYP21A2 LOC100507547 HSPA1B AGPAT1 HLA-DRA MIR6721 C4B DXO EHMT2 GPSM3 HCG23 LOC101929163 STK19 FKBPL HLA-DRB1 C2 PBX2 HLA-DQB1 MIR6833 SNORD48 TNXB HLA-DRB5 C2-AS1 C4A C6orf10 AGER ATF6B HLA-DRB6 HLA-DQA1 NELFE CFB BTNL2 NOTCH4 EGFL8 PPT2 SKIV2L MIR1236 SLC44A4 PPT2-EGFL8 RNF5
esv2759415 Chr.6:31903735 - 32241336 on Build GRCh38 Gain+Loss C2 PBX2 CYP21A1P MIR6833 TNXB C2-AS1 PRRT1 C4A AGER ATF6B TNXA CYP21A2 LOC100507547 NELFE CFB AGPAT1 MIR6721 C4B DXO GPSM3 NOTCH4 EGFL8 PPT2 SKIV2L MIR1236 PPT2-EGFL8 STK19 FKBPL RNF5
nsv1126749 Chr.6:31457323 - 32594423 on Build GRCh38 Deletion LY6G6C ZBTB12 CYP21A1P C6orf48 HSPA1A APOM SNORD52 PRRT1 AIF1 VARS NEU1 TNXA CYP21A2 LY6G5B NCR3 LOC100507547 LY6G5C SNORD117 HSPA1B AGPAT1 HLA-DRA MIR6721 C4B DXO EHMT2 BAG6 GPSM3 LTA HCG23 LOC101929163 SAPCD1 LY6G6D STK19 CLIC1 SNORA38 FKBPL VWA7 NFKBIL1 HLA-DRB1 LST1 CSNK2B LTB C2 ATP6V1G2-DDX39B PBX2 C6orf47 MIR6833 MSH5-SAPCD1 SNORD84 SNORD48 HCG26 TNXB HLA-DRB5 LY6G6F MICB C2-AS1 DDX39B C4A HCP5 C6orf10 AGER ATF6B PRRC2A HSPA1L HLA-DRB6 TNF MIR4646 LSM2 NELFE LOC100287329 CFB MCCD1 BTNL2 MSH5 MIR6832 GPANK1 NOTCH4 EGFL8 PPT2 DDAH2 ATP6V1G2 SKIV2L MIR1236 SLC44A4 PPT2-EGFL8 SAPCD1-AS1 LOC102725068 DDX39B-AS1 C6orf25 RNF5 LY6G6E ABHD16A
nsv602105 Chr.6:32183666 - 32210123 on Build GRCh38 Loss PBX2 AGER GPSM3 NOTCH4
nsv1073969 Chr.6:31456422 - 33480523 on Build GRCh38 Deletion HLA-DQB2 LY6G6C HLA-DMB HLA-DQB1-AS1 TAP1 VARS NEU1 BRD2 TNXA RING1 LY6G5B LOC100507547 LY6G5C PSMB9 TAPBP SNORD117 AGPAT1 MIR6721 DXO EHMT2 BAG6 HLA-DPB1 SAPCD1 LY6G6D RGL2 MIR5004 RPS18 STK19 SNORA38 NFKBIL1 HLA-DRB1 LST1 PSMB8 PSMB8-AS1 LTB C2 ATP6V1G2-DDX39B PBX2 HLA-DQB1 MIR6833 SNORD84 KIFC1 LY6G6F ZBTB9 MICB C4A HSD17B8 MIR6873 HCG25 C6orf10 ATF6B HLA-DQA1 COL11A2 MIR4646 NELFE WDR46 SYNGAP1 LOC100287329 CFB BTNL2 MSH5 PPT2 DDAH2 ATP6V1G2 HCG24 HLA-DMA DDX39B-AS1 RNF5 ZBTB12 CYP21A1P C6orf48 HLA-DPA1 HSPA1A APOM SNORD52 PRRT1 AIF1 CYP21A2 CUTA NCR3 MIR6834 HSPA1B HLA-DRA C4B HLA-DOB GPSM3 LTA HCG23 LOC101929163 CLIC1 FKBPL PPP1R2P1 VWA7 HLA-DQA2 MIR219A1 PHF1 CSNK2B ZBTB22 LOC100294145 C6orf47 HLA-DOA MSH5-SAPCD1 B3GALT4 SNORD48 HCG26 TNXB HLA-DRB5 C2-AS1 DDX39B SLC39A7 HCP5 RXRB MIR3135B AGER HLA-DPB2 PRRC2A VPS52 HSPA1L HLA-DRB6 TNF LSM2 TAP2 DAXX MCCD1 MIR6832 GPANK1 NOTCH4 EGFL8 SKIV2L MIR1236 SLC44A4 PPT2-EGFL8 PFDN6 SAPCD1-AS1 LOC102725068 C6orf25 LY6G6E ABHD16A
dgv10486n54 Chr.6:32187671 - 32193653 on Build GRCh38 Loss PBX2 GPSM3
nsv602104 Chr.6:32096949 - 32203906 on Build GRCh38 Loss PBX2 MIR6833 AGPAT1 MIR6721 TNXB PRRT1 GPSM3 NOTCH4 EGFL8 PPT2 AGER ATF6B PPT2-EGFL8 FKBPL LOC100507547 RNF5
nsv1112900 Chr.6:31455323 - 33480423 on Build GRCh38 Deletion HLA-DQB2 LY6G6C HLA-DMB HLA-DQB1-AS1 TAP1 VARS NEU1 BRD2 TNXA RING1 LY6G5B LOC100507547 LY6G5C PSMB9 TAPBP SNORD117 AGPAT1 MIR6721 DXO EHMT2 BAG6 HLA-DPB1 SAPCD1 LY6G6D RGL2 MIR5004 RPS18 STK19 SNORA38 NFKBIL1 HLA-DRB1 LST1 PSMB8 PSMB8-AS1 LTB C2 ATP6V1G2-DDX39B PBX2 HLA-DQB1 MIR6833 SNORD84 KIFC1 LY6G6F ZBTB9 MICB C4A HSD17B8 MIR6873 HCG25 C6orf10 ATF6B HLA-DQA1 COL11A2 MIR4646 NELFE WDR46 SYNGAP1 LOC100287329 CFB BTNL2 MSH5 PPT2 DDAH2 ATP6V1G2 HCG24 HLA-DMA DDX39B-AS1 RNF5 ZBTB12 CYP21A1P C6orf48 HLA-DPA1 HSPA1A APOM SNORD52 PRRT1 AIF1 CYP21A2 CUTA NCR3 MIR6834 HSPA1B HLA-DRA C4B HLA-DOB GPSM3 LTA HCG23 LOC101929163 CLIC1 FKBPL PPP1R2P1 VWA7 HLA-DQA2 MIR219A1 PHF1 CSNK2B ZBTB22 LOC100294145 C6orf47 HLA-DOA MSH5-SAPCD1 B3GALT4 SNORD48 HCG26 TNXB HLA-DRB5 C2-AS1 DDX39B SLC39A7 HCP5 RXRB MIR3135B AGER HLA-DPB2 PRRC2A VPS52 HSPA1L HLA-DRB6 TNF LSM2 TAP2 DAXX MCCD1 MIR6832 GPANK1 NOTCH4 EGFL8 SKIV2L MIR1236 SLC44A4 PPT2-EGFL8 PFDN6 SAPCD1-AS1 LOC102725068 C6orf25 LY6G6E ABHD16A
dgv10404n54 Chr.6:31312550 - 32516591 on Build GRCh38 Loss LY6G6C ZBTB12 CYP21A1P C6orf48 MICA HSPA1A APOM SNORD52 PRRT1 AIF1 VARS NEU1 TNXA CYP21A2 LY6G5B NCR3 LOC100507547 LY6G5C MIR6891 SNORD117 HSPA1B AGPAT1 HLA-DRA MIR6721 C4B DXO EHMT2 BAG6 GPSM3 LTA HCG23 LOC101929163 SAPCD1 LY6G6D STK19 CLIC1 SNORA38 FKBPL VWA7 NFKBIL1 LST1 CSNK2B LTB C2 ATP6V1G2-DDX39B PBX2 C6orf47 MIR6833 MSH5-SAPCD1 SNORD84 SNORD48 HCG26 TNXB LY6G6F MICB C2-AS1 DDX39B C4A HCP5 C6orf10 AGER ATF6B PRRC2A HSPA1L TNF MIR4646 LSM2 HLA-B NELFE LOC100287329 CFB MCCD1 BTNL2 MSH5 MIR6832 GPANK1 NOTCH4 EGFL8 PPT2 DDAH2 ATP6V1G2 SKIV2L MIR1236 SLC44A4 PPT2-EGFL8 SAPCD1-AS1 LOC102725068 DDX39B-AS1 C6orf25 RNF5 LY6G6E ABHD16A

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