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See other EIF4A1 CNV Assays ›
Gene Symbol
EIF4A1
Assay Reference Genome
Location

Chr.17:7577903 on build GRCh38
Cytoband
17p13.1
Assay ID Hs02423952_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 1973

Gene Name:

 eukaryotic translation initiation factor 4A1

Gene Aliases:

 DDX2A, EIF-4A, EIF4A, eIF-4A-I, eIF4A-I

Location:

 Chr.17:7572706-7579006 on Build GRCh38

Assay Gene Location:

 Overlaps Exon 9 - Intron 9
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
EIF4A1 NM_001204510.1 NP_001191439.1
NM_001416.3 NP_001407.1
AK130082.1
AK289453.1
AK291971.1
AK296664.1 5 768
AK297916.1
AK309274.1 7 977
AK312630.1
BC009585.1 AAH09585.1
BC073752.1 AAH73752.1
BT019880.1 AAV38683.1
BT019881.1 AAV38684.1
D13748.1 BAA02897.1

Target Gene Details

Entrez Gene ID:

 100533955

Gene Name:

 SENP3-EIF4A1 readthrough (NMD candidate)

Gene Aliases:

 -

Location:

 Chr.17:7561992-7579006 on Build GRCh38

Assay Gene Location:

 Overlaps Exon 20 - Intron 20
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
SENP3-EIF4A1 NR_037926.1

Target Gene Details

Entrez Gene ID:

 26781

Gene Name:

 small nucleolar RNA, H/ACA box 67

Gene Aliases:

 RNU67, U67

Location:

 Chr.17:7577955-7578091 on Build GRCh38

Assay Gene Location:

 Overlaps - Exon 1
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
SNORA67 NR_002912.1
Y11161.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
esv2422288 Chr.17:6789933 - 7646709 on Build GRCh38 Deletion TMEM256-PLSCR3 C17orf49 RNASEK BCL6B ALOX12-AS1 TNFSF12 SPEM1 ASGR1 C17orf74 SAT2 SLC16A13 SLC16A11 GABARAP FGF11 TNFSF13 SLC2A4 NLGN2 NEURL4 FXR2 CHRNB1 MIR324 EIF5A RNASEK-C17orf49 ELP5 MIR195 GPS2 SOX15 LOC100996842 SENP3 PHF23 LOC107983988 MIR497 MIR497HG ACADVL SNORD10 TNFSF12-TNFSF13 YBX2 POLR2A ATP1B2 SNORA48 ACAP1 DVL2 SENP3-EIF4A1 FBXO39 TEKT1 CTDNEP1 CD68 EIF4A1 ASGR2 ALOX12 ZBTB4 SLC35G6 MPDU1 DLG4 CLDN7 TMEM102 KCTD11 ALOX12P2 SNORA67 CLEC10A TNK1 TMEM95 TMEM256 PLSCR3 SHBG
nsv960401 Chr.17:7577078 - 7578770 on Build GRCh38 Duplication EIF4A1 SENP3-EIF4A1 SNORA67
nsv574322 Chr.17:7010333 - 7689462 on Build GRCh38 Loss TMEM256-PLSCR3 C17orf49 RNASEK BCL6B ALOX12-AS1 TNFSF12 SPEM1 ASGR1 C17orf74 SAT2 SLC16A13 SLC16A11 GABARAP FGF11 TNFSF13 SLC2A4 NLGN2 NEURL4 FXR2 CHRNB1 MIR324 EIF5A RNASEK-C17orf49 ELP5 MIR195 GPS2 SOX15 LOC100996842 SENP3 PHF23 LOC107983988 MIR497 MIR497HG ACADVL SNORD10 TNFSF12-TNFSF13 YBX2 POLR2A ATP1B2 SNORA48 ACAP1 DVL2 SENP3-EIF4A1 TP53 CTDNEP1 CD68 EIF4A1 ASGR2 ALOX12 ZBTB4 WRAP53 SLC35G6 MPDU1 DLG4 CLDN7 TMEM102 KCTD11 SNORA67 CLEC10A TNK1 TMEM95 TMEM256 PLSCR3 SHBG

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