Hs02424095_cn

• Gene Symbol: CDH17
• Assay Reference Genome Location: Chr.8:94127644 on build GRCh38
• Cytoband: 8q22.1

Target Gene Details

• Entrez Gene ID: 1015
• Gene Name: cadherin 17
• Gene Aliases: CDH16, HPT-1, HPT1
• Location: Chr.8:94127162-94217303 on Build GRCh38
• Assay Gene Location: Within Exon 19

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
CDH17	NM_001144663.1	18	3221	NP_001138135.1
	NM_004063.3	18	3220	NP_004054.3
	XM_011516790.1	17	2979	XP_011515092.1
	AI566493.1	1	483
	AK130441.1	2	822
	BF591263.1	1	484
	U07969.1	18	3182	AAA19021.1
	X83228.1	18	3187	CAA58231.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv1022473	Chr.8:91854892 - 94250166 on Build GRCh38	Loss	FAM92A1 TRIQK LOC102724710 LOC105375640 LINC00535 RUNX1T1 MIR378D2 CDH17 RBM12B-AS1 PDP1 TMEM67 MIR8084 RBM12B C8orf87 FLJ46284 GEM

More Information

• Set Membership: Intragenic, Exonic, DGV Variation

Panther Classification:

Molecular Function -

cadherin

Gene Ontology Categories:

Process(es)

germinal center B cell differentiation
marginal zone B cell differentiation
transport
oligopeptide transport
cell adhesion
homophilic cell adhesion via plasma membrane adhesion molecules
integrin-mediated signaling pathway
calcium-dependent cell-cell adhesion via plasma membrane cell adhesion molecules
positive regulation of integrin activation by cell surface receptor linked signal transduction
adherens junction organization
oligopeptide transmembrane transport
spleen development

Function(s)

integrin binding
transporter activity
proton-dependent oligopeptide secondary active transmembrane transporter activity
calcium ion binding