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See other KDM5C CNV Assays ›
Gene Symbol
KDM5C
Assay Reference Genome
Location

Chr.X:53191637 on build GRCh38
Cytoband
Xp11.22
Assay ID Hs02490372_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 8242

Gene Name:

 lysine demethylase 5C

Gene Aliases:

 DXS1272E, JARID1C, MRX13, MRXJ, MRXSCJ, MRXSJ, SMCX, XE169

Location:

 Chr.X:53159735-53225422 on Build GRCh38

Assay Gene Location:

 Within Exon 28
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
KDM5C NM_001146702.1 24 5780 NP_001140174.1
NM_001282622.1 26 6543 NP_001269551.1
NM_004187.3 26 6546 NP_004178.2
XM_011530827.2 XP_011529129.1
XM_011530828.1 XP_011529130.1
XM_017029886.1 XP_016885375.1
XM_017029887.1 XP_016885376.1
XM_017029888.1 XP_016885377.1
XM_017029889.1 XP_016885378.1
AI221739.1 1 318
BI711169.1 1 182
EF613277.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
esv2740175 Chr.X:52862926 - 55652533 on Build GRCh38 Deletion TSR2 SNORA109 MTRNR2L10 MIR6857 MIR4536-1 PHF8 IQSEC2 FAM120C SNORA11 MIR98 PAGE3 PFKFB1 FAM156B FAM104B SMC1A PAGE2B PAGE5 ITIH6 USP51 MIRLET7F2 MIR6894 MIR4536-2 PAGE2 FGD1 KANTR HUWE1 MIR6895 MAGED2 RIBC1 ALAS2 FOXR2 GNL3L WNK3 GPR173 APEX2 MAGEH1 TRO TSPYL2 FAM156A LOC100421746 XAGE3 HSD17B10 KDM5C
nsv435891 Chr.X:52861979 - 55653313 on Build GRCh38 Deletion TSR2 SNORA109 MTRNR2L10 MIR6857 MIR4536-1 PHF8 IQSEC2 FAM120C SNORA11 MIR98 PAGE3 PFKFB1 FAM156B FAM104B SMC1A PAGE2B PAGE5 ITIH6 USP51 MIRLET7F2 MIR6894 MIR4536-2 PAGE2 FGD1 KANTR HUWE1 MIR6895 MAGED2 RIBC1 ALAS2 FOXR2 GNL3L WNK3 GPR173 APEX2 MAGEH1 TRO TSPYL2 FAM156A LOC100421746 XAGE3 HSD17B10 KDM5C

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