Hs02496017_cn

• Gene Symbol: CAMTA2
• Assay Reference Genome Location: Chr.17:4970059 on build GRCh38
• Cytoband: 17p13.2

Target Gene Details

• Entrez Gene ID: 23125
• Gene Name: calmodulin binding transcription activator 2
• Gene Aliases: -
• Location: Chr.17:4967992-4988297 on Build GRCh38
• Assay Gene Location: Overlaps Intron 18 - Exon 19

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
CAMTA2	NM_001171166.1			NP_001164637.1
	NM_001171167.1			NP_001164638.1
	NM_001171168.1			NP_001164639.1
	NM_015099.3			NP_055914.2
	XM_006721478.3			XP_006721541.1
	XM_006721481.3			XP_006721544.1
	XM_006721482.3			XP_006721545.1
	XM_011523746.2			XP_011522048.1
	XM_011523747.2			XP_011522049.1
	XM_011523748.2			XP_011522050.1
	XM_011523749.2			XP_011522051.1
	AB020716.1
	AL831849.1			CAD38553.1
	AL833974.1			CAD38818.2
	BC010050.2			AAH10050.2
	BC016163.1			AAH16163.1
	BC032381.1			AAH32381.1
	BC136534.1
	BC142695.1
	BC144232.1
	BC167148.1
	BC167149.1
	BC167151.1
	BC167160.1

Target Gene Details

• Entrez Gene ID: 102465522
• Gene Name: microRNA 6865
• Gene Aliases: hsa-mir-6865
• Location: Chr.17:4970086-4970150 on Build GRCh38
• Assay Gene Location: Overlaps - Exon 1

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
MIR6865	NR_106925.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv833350	Chr.17:4884713 - 5060776 on Build GRCh38	Loss	INCA1 MINK1 SLC52A1 CAMTA2 MIR6864 MIR6865 SLC25A11 PFN1 LOC101927979 SPAG7 LOC102724009 KIF1C C17orf107 CHRNE GP1BA RNF167 ENO3
nsv833349	Chr.17:4853631 - 4991300 on Build GRCh38	Loss	INCA1 MINK1 CAMTA2 MIR6864 MIR6865 SLC25A11 PFN1 LOC101927979 SPAG7 C17orf107 CHRNE GP1BA RNF167 ENO3
nsv574273	Chr.17:4585589 - 5460332 on Build GRCh38	Gain	PELP1 MINK1 SLC52A1 CAMTA2 PSMB6 ALOX15 RPAIN MIR6864 GLTPD2 MIR6865 SPAG7 ZMYND15 PLD2 LOC102724009 KIF1C C17orf107 MED11 CHRNE VMO1 RABEP1 ARRB2 LOC101928000 LOC100130950 LOC101559451 ZFP3 USP6 INCA1 LOC400568 LOC107984973 TM4SF5 SLC25A11 PFN1 LOC101927979 ZNF232 SMTNL2 C1QBP SCIMP ZNF594 DHX33 NUP88 GP1BA CXCL16 RNF167 ENO3

More Information

• Set Membership: Intragenic, Non-exonic, DGV Variation

Panther Classification:

Molecular Function -

DNA-binding transcription factor

Gene Ontology Categories:

Process(es)

regulation of transcription from RNA polymerase II promoter
transcription from RNA polymerase II promoter
cardiac muscle hypertrophy in response to stress
positive regulation of transcription from RNA polymerase II promoter

Function(s)

transcriptional activator activity, RNA polymerase II core promoter proximal region sequence-specific binding
chromatin binding
protein binding
transcription factor binding
histone deacetylase binding
sequence-specific DNA binding