Hs02519250_cn

• Gene Symbol: CORO7
• Assay Reference Genome Location: Chr.16:4383545 on build GRCh38
• Cytoband: 16p13.3

Target Gene Details

• Entrez Gene ID: 79585
• Gene Name: coronin 7
• Gene Aliases: 0610011B16Rik, CRN7, POD1
• Location: Chr.16:4354542-4416961 on Build GRCh38
• Assay Gene Location: Within Intron 9

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
CORO7	NM_001201472.1			NP_001188401.1
	NM_001201473.1			NP_001188402.1
	NM_024535.4			NP_078811.3
	AK025674.1			BAB15211.1
	AK094596.1
	AK097238.1
	AK294045.1
	AK296723.1
	AK296807.1
	AK303353.1
	AK309327.1
	AK309763.1
	BC117289.1
	BC117291.1

Target Gene Details

• Entrez Gene ID: 100529144
• Gene Name: CORO7-PAM16 readthrough
• Gene Aliases: -
• Location: Chr.16:4340251-4416961 on Build GRCh38
• Assay Gene Location: Within Intron 9

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
CORO7-PAM16	NM_001201479.1			NP_001188408.1
	AL833954.1

Target Gene Details

• Entrez Gene ID: 114990
• Gene Name: vasorin
• Gene Aliases: SLITL2
• Location: Chr.16:4371848-4383528 on Build GRCh38
• Assay Gene Location: Overlaps - Exon 2

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
VASN	NM_138440.2			NP_612449.2
	AY358298.1			AAQ88665.1
	AY358299.1			AAQ88666.1
	BC013767.1			AAH13767.1
	BC068575.1			AAH68575.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv471075	Chr.16:4317729 - 4395326 on Build GRCh38	Loss	CORO7 VASN GLIS2 PAM16 GLIS2-AS1 CORO7-PAM16
nsv1160332	Chr.16:4367643 - 4486554 on Build GRCh38	Duplication	CORO7 VASN DNAJA3 HMOX2 NMRAL1 CORO7-PAM16
nsv1046986	Chr.16:4049000 - 5555721 on Build GRCh38	Gain	UBN1 ALG1 GLIS2 GLIS2-AS1 SMIM22 SRL TFAP4 MGRN1 GLYR1 NUDT16L1 SEC14L5 DNAJA3 HMOX2 PPL C16orf96 NMRAL1 C16orf71 EEF2KMT ROGDI ZNF500 NAGPA-AS1 ADCY9 PAM16 RBFOX1 UBALD1 LINC01569 ANKS3 CORO7 VASN C16orf89 MIR6769A CDIP1 LOC105371063 NAGPA SEPT12 CORO7-PAM16
nsv833132	Chr.16:4370092 - 4463448 on Build GRCh38	Loss	CORO7 VASN DNAJA3 NMRAL1 CORO7-PAM16
nsv527866	Chr.16:4206462 - 4412618 on Build GRCh38	Loss	CORO7 VASN GLIS2 PAM16 LOC105371063 GLIS2-AS1 LINC01569 SRL TFAP4 CORO7-PAM16
nsv571274	Chr.16:4309420 - 4441189 on Build GRCh38	Gain	CORO7 VASN DNAJA3 GLIS2 PAM16 GLIS2-AS1 CORO7-PAM16
esv3584924	Chr.16:4330628 - 4469258 on Build GRCh38	Gain	CORO7 VASN DNAJA3 GLIS2 PAM16 NMRAL1 CORO7-PAM16
nsv520212	Chr.16:4354619 - 4390827 on Build GRCh38	Loss	CORO7 VASN CORO7-PAM16
esv23732	Chr.16:4340813 - 4476244 on Build GRCh38	Gain	CORO7 VASN DNAJA3 HMOX2 PAM16 NMRAL1 CORO7-PAM16

More Information

• Set Membership: Intragenic, Intronic, Non-exonic, DGV Variation

Panther Classification:

Molecular Function -

non-motor actin binding protein

Gene Ontology Categories:

Process(es)

Golgi to endosome transport
protein transport
actin filament polymerization
negative regulation of epithelial to mesenchymal transition
negative regulation of transforming growth factor beta receptor signaling pathway
cellular response to hypoxia
cellular response to redox state
cell-cell adhesion

Function(s)

actin binding
protein binding
transforming growth factor beta binding
cadherin binding involved in cell-cell adhesion