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See other ATG7 CNV Assays ›
Gene Symbol
ATG7
Assay Reference Genome
Location

Chr.3:11557447 on build GRCh38
Cytoband
3p25.3
Assay ID Hs02529595_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 10533

Gene Name:

 autophagy related 7

Gene Aliases:

 APG7-LIKE, APG7L, GSA7

Location:

 Chr.3:11272324-11564704 on Build GRCh38

Assay Gene Location:

 Within Exon 27
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
ATG7 NM_001136031.2 18 4752 NP_001129503.2
NM_001144912.1 17 4593 NP_001138384.1
NM_006395.2 19 4833 NP_006386.1
XM_017005547.1 XP_016861036.1
XM_017005554.1 XP_016861043.1
AL122075.1 13 4182 CAB59250.1

Target Gene Details

Entrez Gene ID:

 9686

Gene Name:

 vestigial like family member 4

Gene Aliases:

 VGL-4

Location:

 Chr.3:11556067-11720768 on Build GRCh38

Assay Gene Location:

 Within Exon 14
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
VGLL4 NM_001128219.2 5 2459 NP_001121691.1
NM_001128220.2 4 1834 NP_001121692.1
NM_001128221.2 4 2048 NP_001121693.1
NM_001284390.1 7 2503 NP_001271319.1
NM_001284391.1 5 2176 NP_001271320.1
NM_014667.3 6 2370 NP_055482.2
XM_011534267.2 7 2145 XP_011532569.1
XM_011534268.1 5 2473 XP_011532570.1
XM_011534269.1 5 2167 XP_011532571.1
XM_017007541.1 7 2168 XP_016863030.1
XM_017007542.1 6 2357 XP_016863031.1
AK126479.1 2 3093
AK130542.1 6 2165 BAC85375.1
D50911.3 6 2118

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv955314 Chr.3:11552827 - 11568726 on Build GRCh38 Deletion VGLL4 ATG7
nsv436362 Chr.3:10048344 - 11860564 on Build GRCh38 Deletion LOC101927467 SLC6A11 FANCD2 LINC00852 MIR885 GHRLOS LINC00606 TAMM41 TATDN2 SLC6A1 SEC13 IRAK2 HRH1 SLC6A1-AS1 VGLL4 BRK1 ATP2B2-IT2 FANCD2OS ATP2B2 MIR378B ATG7 VHL GHRL
nsv517831 Chr.3:11541780 - 11576994 on Build GRCh38 Loss VGLL4 ATG7
esv2677845 Chr.3:11489013 - 11864643 on Build GRCh38 Deletion VGLL4 TAMM41 ATG7
dgv762e201 Chr.3:10008967 - 11913136 on Build GRCh38 Deletion CIDECP FANCD2 LINC00852 LOC401052 MIR885 TAMM41 TATDN2 SEC13 HRH1 VGLL4 ATP2B2 GHRL LOC101927467 SLC6A11 FANCD2P2 GHRLOS LINC00606 SLC6A1 EMC3 IRAK2 SLC6A1-AS1 BRK1 ATP2B2-IT2 FANCD2OS MIR378B ATG7 VHL
nsv1121603 Chr.3:10071433 - 11889279 on Build GRCh38 Deletion LOC101927467 SLC6A11 FANCD2 LINC00852 FANCD2P2 MIR885 GHRLOS LINC00606 TAMM41 TATDN2 SLC6A1 SEC13 IRAK2 HRH1 SLC6A1-AS1 VGLL4 BRK1 ATP2B2-IT2 FANCD2OS ATP2B2 MIR378B ATG7 VHL GHRL
nsv436869 Chr.3:10064456 - 11877985 on Build GRCh38 Insertion LOC101927467 SLC6A11 FANCD2 LINC00852 FANCD2P2 MIR885 GHRLOS LINC00606 TAMM41 TATDN2 SLC6A1 SEC13 IRAK2 HRH1 SLC6A1-AS1 VGLL4 BRK1 ATP2B2-IT2 FANCD2OS ATP2B2 MIR378B ATG7 VHL GHRL
nsv1073204 Chr.3:9996548 - 11875005 on Build GRCh38 Deletion CIDECP FANCD2 LINC00852 LOC401052 MIR885 TAMM41 TATDN2 SEC13 HRH1 VGLL4 ATP2B2 GHRL LOC101927467 SLC6A11 FANCD2P2 EMC3-AS1 GHRLOS LINC00606 SLC6A1 EMC3 IRAK2 SLC6A1-AS1 BRK1 ATP2B2-IT2 FANCD2OS MIR378B ATG7 VHL

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