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See other SPATA22 CNV Assays ›
Gene Symbol
SPATA22
Assay Reference Genome
Location

Chr.17:3443215 on build GRCh38
Cytoband
17p13.2
Assay ID Hs02531898_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 84690

Gene Name:

 spermatogenesis associated 22

Gene Aliases:

 NYD-SP20, NYDSP20

Location:

 Chr.17:3440011-3513852 on Build GRCh38

Assay Gene Location:

 Within Exon 9
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
SPATA22 NM_001170695.1 8 1035 NP_001164166.1
NM_001170696.1 7 906 NP_001164167.1
NM_001170697.1 8 1041 NP_001164168.1
NM_001170698.1 8 1056 NP_001164169.1
NM_001170699.1 NP_001164170.1
NM_001321336.1 8 1325 NP_001308265.1
NM_001321337.1 8 1373 NP_001308266.1
NM_032598.4 8 1097 NP_115987.2
AF367472.1 8 989 AAK53408.1
AK295299.1 8 1325
AK301892.1
AY032684.1 7 855 AAK51120.1
AY035867.1 8 1038 AAK61373.1
AY035868.1 8 1097 AAK61374.1
BC029483.1 8 982 AAH29483.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
esv3892950 Chr.17:3131812 - 3577153 on Build GRCh38 Loss SPATA22 OR3A2 TRPV3 OR1E1 TRPV1 OR1E2 OR3A3 OR1A2 OR1D4 ASPA OR3A1 OR1A1 OR3A4P
nsv1065489 Chr.17:2631416 - 3948349 on Build GRCh38 Gain SPATA22 P2RX5 OR1D5 OR3A2 TRPV3 OR1E1 ITGAE CLUH OR1D4 NCBP3 ASPA LOC105371591 OR1A1 MIR1253 LOC101927911 OR1G1 ATP2A3 OR3A4P RAP1GAP2 EMC6 OR1D2 P2RX5-TAX1BP3 MIR6776 CCDC92B CTNS TRPV1 OR1E2 P2RX1 OR3A3 OR1A2 TAX1BP3 LOC105371592 OR3A1 CAMKK1 SHPK PAFAH1B1 GSG2
nsv574232 Chr.17:3254715 - 3503170 on Build GRCh38 Gain SPATA22 ASPA OR3A2 OR3A1 OR1E1 OR1E2 OR3A3 OR3A4P
esv2660206 Chr.17:2679367 - 3519614 on Build GRCh38 Deletion SPATA22 OR1D2 MIR6776 CCDC92B OR1D5 OR3A2 TRPV3 OR1E1 OR1E2 OR3A3 OR1A2 CLUH OR1D4 ASPA LOC105371591 LOC105371592 OR3A1 OR1A1 MIR1253 LOC101927911 OR1G1 OR3A4P PAFAH1B1 RAP1GAP2
nsv1055740 Chr.17:3381841 - 3890153 on Build GRCh38 Gain SPATA22 P2RX5-TAX1BP3 P2RX5 CTNS OR3A2 TRPV3 OR1E1 TRPV1 OR1E2 ITGAE OR3A3 TAX1BP3 NCBP3 ASPA CAMKK1 SHPK GSG2 EMC6
nsv833341 Chr.17:3352243 - 3521390 on Build GRCh38 Loss SPATA22 ASPA OR3A2 TRPV3 OR1E1 OR1E2 OR3A3
nsv574236 Chr.17:3390044 - 3459775 on Build GRCh38 Gain SPATA22 OR1E1 OR1E2 OR3A3
nsv1059413 Chr.17:3365789 - 3453922 on Build GRCh38 Loss SPATA22 OR3A2 OR1E1 OR1E2 OR3A3
nsv1060071 Chr.17:3398474 - 3633472 on Build GRCh38 Loss SPATA22 ASPA TRPV3 TRPV1 OR1E2 OR3A3 SHPK

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