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See other SPATA22 CNV Assays ›
Gene Symbol
SPATA22
Assay Reference Genome
Location

Chr.17:3462717 on build GRCh38
Cytoband
17p13.2
Assay ID Hs02541593_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 84690

Gene Name:

 spermatogenesis associated 22

Gene Aliases:

 NYD-SP20, NYDSP20

Location:

 Chr.17:3440011-3513852 on Build GRCh38

Assay Gene Location:

 Overlaps Intron 5 - Exon 5
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
SPATA22 NM_001170695.1 NP_001164166.1
NM_001170696.1 NP_001164167.1
NM_001170697.1 NP_001164168.1
NM_001170698.1 NP_001164169.1
NM_001170699.1 NP_001164170.1
NM_001321336.1 NP_001308265.1
NM_001321337.1 NP_001308266.1
NM_032598.4 NP_115987.2
AF367472.1 AAK53408.1
AK295299.1
AK301892.1
AY032684.1 AAK51120.1
AY035867.1 AAK61373.1
AY035868.1 AAK61374.1
BC029483.1 AAH29483.1
BG716998.1
BI463957.1
BP371122.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
esv3892950 Chr.17:3131812 - 3577153 on Build GRCh38 Loss TRPV3 ASPA OR1E2 OR3A4P OR1A2 TRPV1 OR1E1 OR3A3 OR1A1 OR3A2 OR1D4 OR3A1 SPATA22
nsv1065489 Chr.17:2631416 - 3948349 on Build GRCh38 Gain PAFAH1B1 LOC101927911 OR1D5 NCBP3 ASPA OR1E2 OR3A4P EMC6 CAMKK1 LOC105371591 TRPV1 P2RX5-TAX1BP3 ATP2A3 SHPK P2RX5 SPATA22 TRPV3 LOC105371592 MIR6776 CLUH OR1A2 OR1E1 ITGAE OR3A3 GSG2 OR1A1 OR3A2 RAP1GAP2 MIR1253 TAX1BP3 OR1D4 CTNS OR1D2 P2RX1 OR1G1 OR3A1 CCDC92B
nsv574232 Chr.17:3254715 - 3503170 on Build GRCh38 Gain OR3A2 ASPA OR1E2 OR3A4P OR1E1 OR3A3 OR3A1 SPATA22
esv2660206 Chr.17:2679367 - 3519614 on Build GRCh38 Deletion PAFAH1B1 TRPV3 LOC101927911 OR1D5 LOC105371592 MIR6776 CLUH ASPA OR1E2 OR3A4P OR1A2 LOC105371591 OR1E1 OR3A3 OR1A1 OR3A2 RAP1GAP2 MIR1253 OR1D4 OR1D2 OR1G1 OR3A1 SPATA22 CCDC92B
nsv1055740 Chr.17:3381841 - 3890153 on Build GRCh38 Gain TRPV3 NCBP3 ASPA OR1E2 EMC6 CAMKK1 TRPV1 OR1E1 ITGAE OR3A3 GSG2 P2RX5-TAX1BP3 OR3A2 SHPK TAX1BP3 CTNS P2RX5 SPATA22
nsv528368 Chr.17:3459775 - 3507608 on Build GRCh38 Gain ASPA SPATA22
nsv833341 Chr.17:3352243 - 3521390 on Build GRCh38 Loss TRPV3 OR3A2 ASPA OR1E2 OR1E1 OR3A3 SPATA22
nsv521277 Chr.17:3390044 - 3468885 on Build GRCh38 Gain OR1E2 OR1E1 OR3A3 SPATA22
nsv1060071 Chr.17:3398474 - 3633472 on Build GRCh38 Loss TRPV3 ASPA SHPK OR1E2 TRPV1 OR3A3 SPATA22

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