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See other DXO CNV Assays ›
Gene Symbol
DXO
Assay Reference Genome
Location

Chr.6:31970743 on build GRCh38
Cytoband
6p21.33
Assay ID Hs02552631_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 1797

Gene Name:

 decapping exoribonuclease

Gene Aliases:

 DOM3L, DOM3Z, NG6, RAI1

Location:

 Chr.6:31969811-31972290 on Build GRCh38

Assay Gene Location:

 Within Exon 4
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
DXO NM_005510.3 4 1008 NP_005501.2
XM_006715005.3 4 1087 XP_006715068.1
XM_017010329.1 4 791 XP_016865818.1
AF059252.1 4 804 AAC78603.1
AK310107.1 2 1173
BC009344.2 4 848 AAH09344.1
BC019083.2 4 1020 AAH19083.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv601970 Chr.6:31970674 - 31980252 on Build GRCh38 Loss DXO STK19
dgv10463n54 Chr.6:31817661 - 32683279 on Build GRCh38 Loss FKBPL TNXB DXO HCG23 HLA-DQB1-AS1 LOC101929163 SNORD52 MIR1236 C4A MIR6721 CYP21A1P SLC44A4 LOC100507547 SNORD48 AGPAT1 AGER NEU1 ZBTB12 C6orf10 C4B HLA-DRB5 HLA-DRB6 HLA-DQB1 ATF6B C6orf48 BTNL2 CFB HLA-DRA EGFL8 PPT2 STK19 PBX2 EHMT2 PPT2-EGFL8 HLA-DRB1 MIR6833 HSPA1A NOTCH4 HSPA1B C2 NELFE GPSM3 TNXA SKIV2L RNF5 PRRT1 C2-AS1 HLA-DQA1 CYP21A2
esv2759415 Chr.6:31903735 - 32241336 on Build GRCh38 Gain+Loss CFB FKBPL TNXB DXO EGFL8 PPT2 STK19 PBX2 MIR1236 C4A PPT2-EGFL8 MIR6721 MIR6833 CYP21A1P LOC100507547 AGPAT1 AGER NOTCH4 C2 NELFE C4B GPSM3 TNXA SKIV2L ATF6B RNF5 PRRT1 C2-AS1 CYP21A2
nsv1126749 Chr.6:31457323 - 32594423 on Build GRCh38 Deletion FKBPL TNXB DXO HCG23 LOC101929163 SNORD52 PRRC2A MIR1236 ABHD16A C4A SAPCD1 DDX39B LY6G6D MIR6721 SNORD117 BAG6 LOC102725068 CYP21A1P SLC44A4 LOC100507547 SAPCD1-AS1 SNORD48 AGPAT1 NCR3 MIR6832 VWA7 AGER NEU1 LTB ZBTB12 MSH5 MSH5-SAPCD1 LOC100287329 C6orf10 C4B LY6G6F HLA-DRB5 TNF HLA-DRB6 ATF6B C6orf48 ATP6V1G2 LY6G6C LY6G5C LSM2 HCP5 HCG26 SNORD84 BTNL2 CFB HLA-DRA EGFL8 MCCD1 PPT2 STK19 PBX2 NFKBIL1 LY6G6E MIR4646 SNORA38 CSNK2B CLIC1 EHMT2 AIF1 PPT2-EGFL8 HSPA1L GPANK1 HLA-DRB1 C6orf25 LY6G5B MIR6833 HSPA1A DDAH2 ATP6V1G2-DDX39B LTA DDX39B-AS1 NOTCH4 HSPA1B C2 APOM NELFE LST1 GPSM3 TNXA C6orf47 SKIV2L RNF5 PRRT1 MICB VARS C2-AS1 CYP21A2
nsv1073969 Chr.6:31456422 - 33480523 on Build GRCh38 Deletion FKBPL TAPBP HLA-DQB1-AS1 PSMB8 MIR1236 ABHD16A C4A SAPCD1 MIR6873 LOC102725068 SLC44A4 HLA-DOB SNORD48 HLA-DPB1 AGPAT1 HCG25 NCR3 VWA7 LOC100287329 B3GALT4 LOC100294145 MIR219A1 DAXX RGL2 TNF ATF6B HCG26 CFB WDR46 KIFC1 HLA-DRA MCCD1 STK19 NFKBIL1 LY6G6E MIR4646 HLA-DMB MIR6834 RXRB CSNK2B CLIC1 EHMT2 HLA-DRB1 MIR6833 MIR5004 DDAH2 SYNGAP1 C2 VPS52 LST1 ZBTB9 ZBTB22 TNXA RPS18 HLA-DQB2 PFDN6 PPP1R2P1 RNF5 MIR3135B PHF1 C2-AS1 HLA-DQA1 HSD17B8 TNXB DXO HCG23 LOC101929163 SNORD52 PRRC2A DDX39B LY6G6D MIR6721 SNORD117 BAG6 BRD2 CYP21A1P LOC100507547 SAPCD1-AS1 MIR6832 AGER HLA-DMA NEU1 LTB ZBTB12 MSH5 MSH5-SAPCD1 C6orf10 C4B LY6G6F HLA-DRB5 HLA-DRB6 HLA-DQB1 C6orf48 ATP6V1G2 LY6G6C LY6G5C LSM2 HCP5 CUTA SNORD84 BTNL2 EGFL8 SLC39A7 PPT2 PBX2 SNORA38 PSMB9 COL11A2 AIF1 PPT2-EGFL8 TAP2 HSPA1L GPANK1 C6orf25 LY6G5B RING1 HLA-DPA1 HSPA1A ATP6V1G2-DDX39B LTA HLA-DOA DDX39B-AS1 NOTCH4 HSPA1B APOM NELFE TAP1 PSMB8-AS1 GPSM3 C6orf47 SKIV2L HLA-DPB2 PRRT1 MICB VARS HLA-DQA2 HCG24 CYP21A2
dgv10403n54 Chr.6:31312324 - 32049763 on Build GRCh38 Loss TNXB DXO SNORD52 PRRC2A MIR1236 ABHD16A C4A SAPCD1 DDX39B LY6G6D SNORD117 BAG6 LOC102725068 CYP21A1P SLC44A4 SAPCD1-AS1 SNORD48 NCR3 MIR6832 VWA7 NEU1 LTB ZBTB12 MSH5 MSH5-SAPCD1 LOC100287329 C4B MIR6891 LY6G6F TNF C6orf48 ATP6V1G2 LY6G6C LY6G5C LSM2 HCP5 HCG26 SNORD84 CFB MCCD1 STK19 NFKBIL1 LY6G6E MIR4646 SNORA38 CSNK2B CLIC1 EHMT2 AIF1 HSPA1L GPANK1 HLA-B C6orf25 LY6G5B HSPA1A DDAH2 ATP6V1G2-DDX39B LTA DDX39B-AS1 HSPA1B C2 APOM NELFE LST1 TNXA C6orf47 MICA SKIV2L MICB VARS C2-AS1 CYP21A2
nsv830628 Chr.6:31919777 - 31979823 on Build GRCh38 Loss MIR1236 CFB SKIV2L DXO STK19 C2 NELFE C2-AS1
nsv1112900 Chr.6:31455323 - 33480423 on Build GRCh38 Deletion FKBPL TAPBP HLA-DQB1-AS1 PSMB8 MIR1236 ABHD16A C4A SAPCD1 MIR6873 LOC102725068 SLC44A4 HLA-DOB SNORD48 HLA-DPB1 AGPAT1 HCG25 NCR3 VWA7 LOC100287329 B3GALT4 LOC100294145 MIR219A1 DAXX RGL2 TNF ATF6B HCG26 CFB WDR46 KIFC1 HLA-DRA MCCD1 STK19 NFKBIL1 LY6G6E MIR4646 HLA-DMB MIR6834 RXRB CSNK2B CLIC1 EHMT2 HLA-DRB1 MIR6833 MIR5004 DDAH2 SYNGAP1 C2 VPS52 LST1 ZBTB9 ZBTB22 TNXA RPS18 HLA-DQB2 PFDN6 PPP1R2P1 RNF5 MIR3135B PHF1 C2-AS1 HLA-DQA1 HSD17B8 TNXB DXO HCG23 LOC101929163 SNORD52 PRRC2A DDX39B LY6G6D MIR6721 SNORD117 BAG6 BRD2 CYP21A1P LOC100507547 SAPCD1-AS1 MIR6832 AGER HLA-DMA NEU1 LTB ZBTB12 MSH5 MSH5-SAPCD1 C6orf10 C4B LY6G6F HLA-DRB5 HLA-DRB6 HLA-DQB1 C6orf48 ATP6V1G2 LY6G6C LY6G5C LSM2 HCP5 CUTA SNORD84 BTNL2 EGFL8 SLC39A7 PPT2 PBX2 SNORA38 PSMB9 COL11A2 AIF1 PPT2-EGFL8 TAP2 HSPA1L GPANK1 C6orf25 LY6G5B RING1 HLA-DPA1 HSPA1A ATP6V1G2-DDX39B LTA HLA-DOA DDX39B-AS1 NOTCH4 HSPA1B APOM NELFE TAP1 PSMB8-AS1 GPSM3 C6orf47 SKIV2L HLA-DPB2 PRRT1 MICB VARS HLA-DQA2 HCG24 CYP21A2
dgv10404n54 Chr.6:31312550 - 32516591 on Build GRCh38 Loss FKBPL TNXB DXO HCG23 LOC101929163 SNORD52 PRRC2A MIR1236 ABHD16A C4A SAPCD1 DDX39B LY6G6D MIR6721 SNORD117 BAG6 LOC102725068 CYP21A1P SLC44A4 LOC100507547 SAPCD1-AS1 SNORD48 AGPAT1 NCR3 MIR6832 VWA7 AGER NEU1 LTB ZBTB12 MSH5 MSH5-SAPCD1 LOC100287329 C6orf10 C4B MIR6891 LY6G6F TNF ATF6B C6orf48 ATP6V1G2 LY6G6C LY6G5C LSM2 HCP5 HCG26 SNORD84 BTNL2 CFB HLA-DRA EGFL8 MCCD1 PPT2 STK19 PBX2 NFKBIL1 LY6G6E MIR4646 SNORA38 CSNK2B CLIC1 EHMT2 AIF1 PPT2-EGFL8 HSPA1L GPANK1 HLA-B C6orf25 LY6G5B MIR6833 HSPA1A DDAH2 ATP6V1G2-DDX39B LTA DDX39B-AS1 NOTCH4 HSPA1B C2 APOM NELFE LST1 GPSM3 TNXA C6orf47 MICA SKIV2L RNF5 PRRT1 MICB VARS C2-AS1 CYP21A2
nsv5247 Chr.6:31957962 - 32055439 on Build GRCh38 Deletion C4A SKIV2L TNXB DXO STK19 NELFE CYP21A1P CYP21A2 C4B TNXA

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