Hs02553618_cn

• Gene Symbol: AGBL5
• Assay Reference Genome Location: Chr.2:27059457 on build GRCh38
• Cytoband: 2p23.3

Target Gene Details

• Entrez Gene ID: 60509
• Gene Name: ATP/GTP binding protein like 5
• Gene Aliases: CCP5, RP75
• Location: Chr.2:27051423-27070622 on Build GRCh38
• Assay Gene Location: Within Exon 13

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
AGBL5	NM_001035507.2	11	2359	NP_001030584.1
	NM_021831.5			NP_068603.4
	NR_104246.1
	XM_005264477.2			XP_005264534.1
	XM_011533011.2			XP_011531313.1
	XM_011533012.2			XP_011531314.1
	XM_011533013.2			XP_011531315.1
	AK025492.1	9	1881	BAB15151.1
	AK302091.1	11	2290
	AL833844.1			CAD38704.1
	BC007415.2

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
dgv6744n54	Chr.2:26973431 - 27151141 on Build GRCh38	Loss	AGBL5-AS1 CGREF1 TRA-AGC8-1 TMEM214 PRR30 EMILIN1 LOC100129724 PREB TCF23 AGBL5 KHK OST4 ABHD1 MAPRE3
nsv817673	Chr.2:27037601 - 27163931 on Build GRCh38	Gain	EMILIN1 PREB AGBL5-AS1 TCF23 AGBL5 CGREF1 KHK TRA-AGC8-1 TMEM214 PRR30 OST4 ABHD1
nsv833603	Chr.2:27059106 - 27263631 on Build GRCh38	Loss	CGREF1 SLC30A3 PRR30 CAD ATRAID EMILIN1 PREB TCF23 AGBL5 KHK SLC5A6 OST4 ABHD1
nsv455974	Chr.2:26989775 - 27128411 on Build GRCh38	Loss	EMILIN1 LOC100129724 AGBL5-AS1 AGBL5 CGREF1 KHK TRA-AGC8-1 TMEM214 OST4 ABHD1 MAPRE3

More Information

• Set Membership: Intragenic, Exonic, DGV Variation

Panther Classification:

Molecular Function -

metalloprotease

Gene Ontology Categories:

Process(es)

proteolysis
protein deglutamylation
protein branching point deglutamylation
defense response to virus

Function(s)

metallocarboxypeptidase activity
zinc ion binding
tubulin binding