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See other ATAT1 CNV Assays ›
Gene Symbol
ATAT1
Assay Reference Genome
Location

Chr.6:30644026 on build GRCh38
Cytoband
6p21.33
Assay ID Hs02576697_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 79969

Gene Name:

 alpha tubulin acetyltransferase 1

Gene Aliases:

 C6orf134, MEC17, Nbla00487, TAT, alpha-TAT, alpha-TAT1

Location:

 Chr.6:30626842-30646823 on Build GRCh38

Assay Gene Location:

 Within Exon 11
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
ATAT1 NM_001031722.3 NP_001026892.1
NM_001190724.2 9 2196 NP_001177653.1
NM_001254952.2 10 1441 NP_001241881.1
NM_001318762.1 9 1958 NP_001305691.1
NM_001318763.1 10 2027 NP_001305692.1
NM_024909.3 11 1510 NP_079185.2
NR_033823.2
XM_005249415.2 XP_005249472.1
XM_011514918.2 XP_011513220.1
XM_017011316.1 XP_016866805.1
AB075512.1 11 1466 BAE45758.1
AK023220.1 10 1993 BAB14472.1
AK225107.1 11 1474
AK298743.1 10 1407
AL833858.1 11 1462 CAD38717.1
BC006105.1 9 1969 AAH06105.1
BC025755.1 AAH25755.1
BC047303.1 AAH47303.1
BX418089.2 1 612
BX418559.2 1 622
CX786272.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv1074389 Chr.6:29116522 - 31446623 on Build GRCh38 Deletion OR12D2 NRM CCHCR1 MICA HCG20 MOG ABCF1 GTF2H4 PPP1R18 PSORS1C3 SNORD32B OR10C1 MIR877 TRIM40 PPP1R11 HLA-F TRIM26 HCG22 HLA-K LOC101929006 HLA-C C6orf15 RPP21 OR2H2 PPP1R10 MDC1 MRPS18B C6orf136 ZNRD1 HCG18 ATAT1 DHX16 TRIM31 RNF39 FLOT1 PSORS1C1 IER3 MDC1-AS1 HCG27 TRIM39-RPP21 MUC22 ZFP57 HLA-B HLA-J HLA-F-AS1 HCG9 CDSN HCG4 MIR6891 HLA-H HLA-E OR5V1 OR12D3 OR2H1 LOC554223 HLA-G PRR3 VARS2 PSORS1C2 MAS1L HCG4B TUBB HCG8 TRIM10 OR11A1 HLA-A TRIM31-AS1 DDR1 POU5F1 HCG17 MUC21 LINC01015 GNL1 IFITM4P TRIM15 ZNRD1ASP GABBR1 LINC00243 MIR4640 HLA-L TCF19 UBD TRIM39 OR2J2 SFTA2 DPCR1 LOC105375014 OR14J1
nsv830626 Chr.6:30590287 - 30765128 on Build GRCh38 Loss C6orf136 NRM HCG20 ABCF1 ATAT1 PPP1R18 DHX16 FLOT1 IER3 TUBB MDC1-AS1 PPP1R10 MDC1 MRPS18B
nsv601481 Chr.6:30454855 - 31316476 on Build GRCh38 Loss CDSN NRM CCHCR1 HCG20 ABCF1 GTF2H4 PPP1R18 PSORS1C3 HLA-E MIR877 PRR3 HCG22 VARS2 PSORS1C2 TUBB HLA-C C6orf15 PPP1R10 DDR1 POU5F1 MDC1 MRPS18B MUC21 C6orf136 GNL1 ATAT1 LINC00243 DHX16 MIR4640 TCF19 FLOT1 PSORS1C1 IER3 MDC1-AS1 HCG27 MUC22 SFTA2 DPCR1 LOC105375014
nsv1122126 Chr.6:28628023 - 31244023 on Build GRCh38 Deletion OR12D2 NRM CCHCR1 LINC00533 HCG20 MOG LINC01623 ABCF1 GTF2H4 PPP1R18 PSORS1C3 SNORD32B OR10C1 MIR877 TRIM40 PPP1R11 HLA-F TRIM26 HCG22 HLA-K LOC101929006 C6orf15 RPP21 OR2H2 PPP1R10 MDC1 MRPS18B C6orf136 ZNRD1 HCG18 ATAT1 HCG14 DHX16 TRIM31 RNF39 FLOT1 PSORS1C1 IER3 OR2J3 MDC1-AS1 HCG27 OR2W1 TRIM39-RPP21 MUC22 ZFP57 HLA-J HLA-F-AS1 HCG9 CDSN HCG4 TRIM27 LOC100129636 HLA-H HLA-E OR5V1 LINC01556 OR12D3 OR2H1 LOC554223 HLA-G PRR3 HCG16 VARS2 PSORS1C2 ZNF311 MAS1L HCG4B TUBB HCG8 TRIM10 OR11A1 HLA-A TRIM31-AS1 DDR1 POU5F1 HCG17 MUC21 LINC01015 GNL1 IFITM4P TRIM15 ZNRD1ASP GABBR1 LINC00243 OR2B3 MIR4640 HLA-L TCF19 UBD TRIM39 OR2J2 SFTA2 DPCR1 LOC105375014 OR14J1
nsv1144137 Chr.6:29720323 - 31338123 on Build GRCh38 Deletion NRM CCHCR1 HCG20 ABCF1 GTF2H4 PPP1R18 PSORS1C3 MIR877 TRIM40 PPP1R11 HLA-F TRIM26 HCG22 HLA-K HLA-C C6orf15 RPP21 PPP1R10 MDC1 MRPS18B C6orf136 ZNRD1 HCG18 ATAT1 DHX16 TRIM31 RNF39 FLOT1 PSORS1C1 IER3 MDC1-AS1 HCG27 TRIM39-RPP21 MUC22 HLA-J HLA-F-AS1 HCG9 CDSN HCG4 HLA-H HLA-E LOC554223 HLA-G PRR3 VARS2 PSORS1C2 HCG4B TUBB HCG8 TRIM10 HLA-A TRIM31-AS1 DDR1 POU5F1 HCG17 MUC21 GNL1 IFITM4P TRIM15 ZNRD1ASP LINC00243 MIR4640 HLA-L TCF19 TRIM39 SFTA2 DPCR1 LOC105375014
nsv601264 Chr.6:29883666 - 31320716 on Build GRCh38 Loss NRM CCHCR1 HCG20 ABCF1 GTF2H4 PPP1R18 PSORS1C3 MIR877 TRIM40 PPP1R11 TRIM26 HCG22 HLA-K HLA-C C6orf15 RPP21 PPP1R10 MDC1 MRPS18B C6orf136 ZNRD1 HCG18 ATAT1 DHX16 TRIM31 RNF39 FLOT1 PSORS1C1 IER3 MDC1-AS1 HCG27 TRIM39-RPP21 MUC22 HLA-J HCG9 CDSN HLA-H HLA-E PRR3 VARS2 PSORS1C2 HCG4B TUBB HCG8 TRIM10 HLA-A TRIM31-AS1 DDR1 POU5F1 HCG17 MUC21 GNL1 TRIM15 ZNRD1ASP LINC00243 MIR4640 HLA-L TCF19 TRIM39 SFTA2 DPCR1 LOC105375014
esv2731791 Chr.6:30404802 - 31346410 on Build GRCh38 Deletion CDSN NRM CCHCR1 HCG20 ABCF1 GTF2H4 PPP1R18 PSORS1C3 HLA-E MIR877 PRR3 HCG22 VARS2 PSORS1C2 TUBB HLA-C C6orf15 PPP1R10 DDR1 POU5F1 MDC1 MRPS18B MUC21 C6orf136 GNL1 ATAT1 LINC00243 DHX16 MIR4640 TCF19 FLOT1 PSORS1C1 IER3 MDC1-AS1 HCG27 MUC22 SFTA2 DPCR1 LOC105375014
esv2670269 Chr.6:30498650 - 31067145 on Build GRCh38 Deletion NRM HCG20 ABCF1 GTF2H4 PPP1R18 MIR877 PRR3 HCG22 VARS2 TUBB PPP1R10 DDR1 MDC1 MRPS18B MUC21 C6orf136 GNL1 ATAT1 LINC00243 DHX16 MIR4640 FLOT1 IER3 MDC1-AS1 MUC22 SFTA2 DPCR1 LOC105375014
esv3411275 Chr.6:29981607 - 31490616 on Build GRCh38 Duplication NRM CCHCR1 MICA HCG20 ABCF1 GTF2H4 PPP1R18 PSORS1C3 HCP5 MIR877 TRIM40 PPP1R11 TRIM26 HCG22 HLA-C C6orf15 RPP21 PPP1R10 MDC1 MRPS18B C6orf136 ZNRD1 HCG18 ATAT1 DHX16 TRIM31 RNF39 FLOT1 PSORS1C1 IER3 MDC1-AS1 HCG27 TRIM39-RPP21 MUC22 HLA-B HLA-J CDSN MIR6891 HLA-E PRR3 VARS2 HCG26 PSORS1C2 TUBB HCG8 TRIM10 TRIM31-AS1 DDR1 POU5F1 HCG17 MUC21 GNL1 TRIM15 ZNRD1ASP LINC00243 MIR4640 HLA-L TCF19 TRIM39 SFTA2 DPCR1 LOC102725068 LOC105375014

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