Hs02583398_cn

• Gene Symbol: TMEM256
• Assay Reference Genome Location: Chr.17:7404145 on build GRCh38
• Cytoband: 17p13.1

Target Gene Details

• Entrez Gene ID: 254863
• Gene Name: transmembrane protein 256
• Gene Aliases: C17orf61
• Location: Chr.17:7402974-7404131 on Build GRCh38
• Assay Gene Location: Overlaps - Exon 1

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
TMEM256	NM_152766.3			NP_689979.1
	BC030270.2			AAH30270.1
	CB140450.1
	EB386328.1

Target Gene Details

• Entrez Gene ID: 100529211
• Gene Name: TMEM256-PLSCR3 readthrough (NMD candidate)
• Gene Aliases: C17orf61-PLSCR3
• Location: Chr.17:7389727-7404131 on Build GRCh38
• Assay Gene Location: Overlaps - Exon 1

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
TMEM256-PLSCR3	NR_037719.1
	AK055822.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
esv2422288	Chr.17:6789933 - 7646709 on Build GRCh38	Deletion	SENP3 TMEM256-PLSCR3 LOC107983988 FGF11 TNFSF13 SPEM1 SENP3-EIF4A1 ASGR2 ELP5 RNASEK-C17orf49 SLC16A13 PHF23 MIR324 ALOX12P2 DVL2 CD68 DLG4 EIF5A TEKT1 NEURL4 YBX2 MIR195 ACAP1 TMEM102 ASGR1 TNFSF12-TNFSF13 POLR2A SAT2 TNK1 MPDU1 ALOX12-AS1 CLEC10A ZBTB4 PLSCR3 KCTD11 GABARAP LOC100996842 EIF4A1 TMEM95 SNORD10 TMEM256 C17orf49 GPS2 SOX15 BCL6B FBXO39 SLC35G6 ATP1B2 ALOX12 SLC2A4 SHBG FXR2 SLC16A11 MIR497 MIR497HG CTDNEP1 CHRNB1 C17orf74 ACADVL SNORA67 RNASEK NLGN2 SNORA48 CLDN7 TNFSF12
nsv523672	Chr.17:7379825 - 7549660 on Build GRCh38	Loss	ZBTB4 TMEM256-PLSCR3 LOC107983988 FGF11 PLSCR3 SPEM1 SLC35G6 CHRNB1 C17orf74 TMEM102 TMEM256 TNFSF12-TNFSF13 POLR2A NLGN2 TNK1 TNFSF12
esv2662967	Chr.17:7403326 - 7408473 on Build GRCh38	Deletion	TMEM256-PLSCR3 TMEM256 NLGN2
esv1007381	Chr.17:7391600 - 7405025 on Build GRCh38	Deletion	TMEM256-PLSCR3 PLSCR3 TMEM256
nsv952118	Chr.17:7174582 - 7456981 on Build GRCh38	Deletion	TMEM256-PLSCR3 LOC107983988 FGF11 PLSCR3 SPEM1 KCTD11 GABARAP ELP5 TMEM95 TMEM256 GPS2 PHF23 MIR324 DVL2 SLC2A4 DLG4 EIF5A CTDNEP1 NEURL4 CHRNB1 YBX2 C17orf74 ACADVL ACAP1 TMEM102 ASGR1 NLGN2 CLDN7 TNK1
nsv470575	Chr.17:7388788 - 7432736 on Build GRCh38	Loss	C17orf74 TMEM256-PLSCR3 LOC107983988 PLSCR3 SPEM1 TMEM256 NLGN2 TNK1
nsv457659	Chr.17:7010333 - 7689462 on Build GRCh38	Loss	SENP3 TP53 TMEM256-PLSCR3 LOC107983988 FGF11 TNFSF13 SPEM1 SENP3-EIF4A1 ASGR2 ELP5 RNASEK-C17orf49 SLC16A13 PHF23 MIR324 DVL2 CD68 DLG4 EIF5A NEURL4 YBX2 MIR195 ACAP1 TMEM102 ASGR1 TNFSF12-TNFSF13 POLR2A SAT2 TNK1 MPDU1 ALOX12-AS1 CLEC10A ZBTB4 PLSCR3 KCTD11 GABARAP LOC100996842 EIF4A1 TMEM95 SNORD10 WRAP53 TMEM256 C17orf49 GPS2 SOX15 BCL6B SLC35G6 ATP1B2 ALOX12 SLC2A4 SHBG FXR2 SLC16A11 MIR497 MIR497HG CTDNEP1 CHRNB1 C17orf74 ACADVL SNORA67 RNASEK NLGN2 SNORA48 CLDN7 TNFSF12

More Information

• Set Membership: Intragenic, Non-exonic, DGV Variation

Gene Ontology Categories:

Process(es)

biological_process

Function(s)

molecular_function