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See other BCL2L12 CNV Assays ›
Gene Symbol
BCL2L12
Assay Reference Genome
Location

Chr.19:49665850 on build GRCh38
Cytoband
19q13.33
Assay ID Hs02583697_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 83596

Gene Name:

 BCL2 like 12

Gene Aliases:

 -

Location:

 Chr.19:49665072-49673916 on Build GRCh38

Assay Gene Location:

 Within Exon 1
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
BCL2L12 NM_001040668.1 1 709 NP_001035758.1
NM_001282516.1 1 709 NP_001269445.1
NM_001282517.1 1 709 NP_001269446.1
NM_001282519.1 1 709 NP_001269448.1
NM_001282520.1 1 709 NP_001269449.1
NM_001282521.1 1 709 NP_001269450.1
NM_138639.1 1 709 NP_619580.1
NR_104200.1 1 709
NR_104201.1 1 709
NR_104202.1 1 709
NR_104203.1 1 709
NR_104204.1 1 709
NR_104205.1 1 709
XM_017027345.1 1 779 XP_016882834.1
XM_017027346.1 1 779 XP_016882835.1
BC104004.1 1 285 AAI04005.1
BC104005.1 1 285 AAI04006.1
BC104006.1 1 285 AAI04007.1
FJ868798.1
FJ868799.1
FJ868800.1
FJ868801.1
FJ868802.1
FJ868803.1
FJ911906.1
FJ911907.1
FJ911908.1
HM347053.1
KR820244.1
KR820245.1
KR820246.1
KR820247.1
KR820248.1
KR820249.1
KR820250.1
KR820251.1
KR820252.1
KR820253.1
KR820254.1
KR820255.1
KR820256.1
KR820257.1
KR820258.1
KR820259.1
KR820260.1
KR820261.1
KR820262.1
KR820263.1
KR820264.1
KR820265.1
KR820266.1
KR820267.1
KR820268.1
KR820269.1
KR820270.1
KR820271.1
KR820272.1
KR820273.1
KR820274.1
KR820275.1
KR820276.1
KR820277.1
KR820278.1
KR820279.1
KR820280.1
KR820281.1
KR820282.1
KR820283.1
KR820284.1
KR820285.1
KR820286.1
KR820287.1
KR820288.1
KR820289.1
KR820290.1
KR820291.1
KR820292.1
KR820293.1

Target Gene Details

Entrez Gene ID:

 3661

Gene Name:

 interferon regulatory factor 3

Gene Aliases:

 IIAE7

Location:

 Chr.19:49659569-49665875 on Build GRCh38

Assay Gene Location:

 Overlaps - Exon 1
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
IRF3 NM_001197122.1 NP_001184051.1
NM_001197123.1 NP_001184052.1
NM_001197124.1 NP_001184053.1
NM_001197125.1 NP_001184054.1
NM_001197126.1 NP_001184055.1
NM_001197127.1 NP_001184056.1
NM_001197128.1 NP_001184057.1
NM_001571.5 NP_001562.1
NR_045568.1
XM_006723197.1 XP_006723260.1
XM_006723198.1 XP_006723261.1
XM_006723202.2 XP_006723265.1
XM_017026766.1 XP_016882255.1
XM_017026767.1 XP_016882256.1
AK057577.1
AK292027.1
CB961512.1
DA999381.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv469715 Chr.19:49572544 - 49730286 on Build GRCh38 Gain+Loss SCAF1 CPT1C MIR5088 RRAS PRR12 NOSIP BCL2L12 PRMT1 PRRG2 IRF3 ADM5
nsv833865 Chr.19:49572545 - 49730286 on Build GRCh38 Gain+Loss SCAF1 CPT1C MIR5088 RRAS PRR12 NOSIP BCL2L12 PRMT1 PRRG2 IRF3 ADM5
nsv9739 Chr.19:47901840 - 50143063 on Build GRCh38 Gain+Loss CARD8-AS1 CCDC114 TSKS SNAR-C1 SNAR-A14 NTF4 PRR12 C19orf68 LOC101928295 PRMT1 CGB3 CYTH2 GFY SNORD32A PTH2 LOC101059948 ALDH16A1 NTN5 AP2A1 TBC1D17 MIR6798 ATF5 SNAR-D SPHK2 NUP62 PLEKHA4 SNAR-A3 SNAR-C3 SIGLEC16 SNAR-A9 FLT3LG LOC105372430 PNKP LMTK3 GRWD1 LHB BSPH1 SLC17A7 CGB2 MIR4751 NOSIP SNAR-A7 SNAR-C5 HRC SNAR-C4 CGB1 DHDH RPL18 LOC100287477 MIR4324 FUT2 NUCB1-AS1 ZNF114 PLA2G4C FUT1 SNORD33 CCDC155 RUVBL2 C19orf73 SNAR-B2 SLC6A16 HSD17B14 SNAR-G2 PPFIA3 TULP2 CGB7 FCGRT PIH1D1 AKT1S1 CPT1C CGB5 IL4I1 RRAS RPS11 MIR4749 SNORD34 LOC105447645 SNORD35B GRIN2D ADM5 MAMSTR RCN3 VRK3 MIR6800 SNAR-A13 MED25 SNAR-A1 DBP EMP3 CABP5 CA11 PTOV1-AS2 ELSPBP1 SNAR-A6 SNAR-A11 SNAR-A5 BAX SNRNP70 PLA2G4C-AS1 PTOV1-AS1 PPP1R15A SNORD35A DKKL1 LIG1 TMEM143 CGB8 SNAR-A12 SULT2B1 SIGLEC11 SCAF1 LIN7B SNAR-B1 IZUMO1 KCNJ14 SEC1P SNAR-G1 CD37 TEAD2 SNAR-A2 GYS1 PTOV1 BCL2L12 MIR6799 RPL13A PRRG2 TRPM4 FLJ26850 FUZ KCNA7 FGF21 SNAR-A4 SNAR-A10 SPACA4 MIR4750 BCAT2 IRF3 SYNGR4 KDELR1 CARD8 RASIP1 MIR150 MIR5088 FTL NUCB1 SNAR-C2 FAM83E SNAR-A8 ZNF473
nsv470150 Chr.19:49618821 - 49856789 on Build GRCh38 Gain SCAF1 FUZ TSKS PRR12 PTOV1-AS1 PRMT1 MIR6800 IRF3 MED25 CPT1C MIR5088 PTOV1 RRAS AP2A1 BCL2L12 MIR4749 PTOV1-AS2 MIR6799 ADM5
nsv833864 Chr.19:49551790 - 49733819 on Build GRCh38 Gain SCAF1 CPT1C MIR5088 RRAS PRR12 NOSIP BCL2L12 PRMT1 PRRG2 IRF3 ADM5
nsv953600 Chr.19:49555044 - 49938043 on Build GRCh38 Deletion SCAF1 TSKS MIR4751 PRR12 NOSIP PRMT1 MIR6800 MED25 PTOV1 AP2A1 BCL2L12 TBC1D17 PTOV1-AS2 MIR6799 ATF5 PRRG2 NUP62 FUZ PTOV1-AS1 MIR4750 PNKP IRF3 AKT1S1 CPT1C MIR5088 IL4I1 RRAS MIR4749 ADM5
nsv1160655 Chr.19:49489110 - 49841830 on Build GRCh38 Deletion SCAF1 RCN3 TSKS PRR12 NOSIP PRMT1 MIR6800 MED25 SNORD32A AP2A1 BCL2L12 MIR6799 RPL13A PRRG2 SNORD33 FUZ PTOV1-AS1 IRF3 FCGRT SNORD35A MIR150 CPT1C MIR5088 RRAS RPS11 SNORD34 SNORD35B ADM5
nsv828578 Chr.19:49560777 - 49680548 on Build GRCh38 Loss SCAF1 RRAS PRR12 NOSIP BCL2L12 PRMT1 PRRG2 IRF3

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More Information


Set Membership:

 Intragenic Exonic Non-exonic DGV Variation

Panther Classification:

Gene Ontology Categories:

Function(s) Process(es)


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