Hs02590233_cn

• Gene Symbol: C17orf62
• Assay Reference Genome Location: Chr.17:82443396 on build GRCh38
• Cytoband: 17q25.3

Target Gene Details

• Entrez Gene ID: 79415
• Gene Name: chromosome 17 open reading frame 62
• Gene Aliases: -
• Location: Chr.17:82442586-82450831 on Build GRCh38
• Assay Gene Location: Within Exon 7

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
C17orf62	NM_001033046.3	7	1342	NP_001028218.1
	NM_001100407.2	8	1392	NP_001093877.1
	NM_001100408.2	6	1300	NP_001093878.1
	NM_001193653.1	8	1612	NP_001180582.1
	NM_001193654.1	7	1562	NP_001180583.1
	NM_001193655.1	7	1506	NP_001180584.1
	NM_001193657.1	8	1559	NP_001180586.1
	NR_036514.1	6	1268
	NR_036516.1	6	1219
	NR_036517.1	5	1177
	NR_036518.1	4	1103
	XM_006722293.2	6	2067	XP_006722356.1
	XM_011523606.2	7	2199	XP_011521908.1
	XM_017025072.1	6	2247	XP_016880561.1
	XM_017025073.1	5	2205	XP_016880562.1
	XM_017025074.1	8	1292	XP_016880563.1
	XM_017025075.1	8	2061	XP_016880564.1
	XM_017025076.1	9	1289	XP_016880565.1
	XM_017025077.1	8	1453	XP_016880566.1
	XM_017025078.1	7	1250	XP_016880567.1
	AF269290.1	2	1470	AAG23173.1
	AK027743.1	4	1043	BAB55335.1
	AK054876.1	7	1154	BAB70818.1
	AK056342.1	6	1175	BAB71156.1
	AK074950.1	8	1489
	AK090484.1	6	3413	BAC03465.1
	AK092865.1	4	2401
	AK225389.1	7	1248
	BC003595.1	7	1226	AAH03595.1
	BC004171.2	7	1226	AAH04171.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv1160502	Chr.17:82411695 - 82526070 on Build GRCh38	Deletion	OGFOD3 HEXDC NARF C17orf62 FOXK2
esv3641424	Chr.17:82434625 - 82462586 on Build GRCh38	Gain	HEXDC NARF C17orf62
nsv1062980	Chr.17:82408938 - 82687942 on Build GRCh38	Gain	MIR4525 OGFOD3 WDR45B HEXDC RAB40B NARF C17orf62 FOXK2
nsv428351	Chr.17:81152631 - 83064073 on Build GRCh38	Gain	CSNK1D DUS1L WDR45B MIR6787 LOC101929511 NOTUM HEXDC LOC105376790 B3GNTL1 TEX19 RFNG CCDC137 CCDC57 UTS2R LINC00482 CEP131 ARL16 SNORD134 ANAPC11 NARF RAC3 MIR3186 LOC105376791 P4HB MIR4740 CD7 FN3K OXLD1 PDE6G ARHGDIA FAAP100 PYCR1 LOC100130370 BAHCC1 ZNF750 PPP1R27 ASPSCR1 C17orf62 HGS FN3KRP TMEM105 TEPSIN LOC105371925 DCXR MIR4525 OGFOD3 MCRIP1 MRPL12 MYADML2 C17orf89 LRRC45 FOXK2 SLC25A10 AATK-AS1 SLC16A3 GPS1 ACTG1 AATK SIRT7 STRA13 LOC105371944 FSCN2 SECTM1 MAFG-AS1 NPB FASN MIR6786 MAFG TSPAN10 PCYT2 GCGR TBCD RAB40B ALYREF LOC101929552 SLC38A10 NPLOC4
nsv1067160	Chr.17:82381853 - 82446450 on Build GRCh38	Loss	OGFOD3 HEXDC LOC105376790 C17orf62
nsv469561	Chr.17:82251148 - 82472274 on Build GRCh38	Loss	CD7 SECTM1 CSNK1D OGFOD3 LOC101929511 HEXDC LOC105376790 NARF TEX19 C17orf62 UTS2R
nsv833574	Chr.17:82419054 - 82579254 on Build GRCh38	Gain	HEXDC NARF C17orf62 FOXK2
nsv1067194	Chr.17:82294731 - 82653129 on Build GRCh38	Gain	CD7 SECTM1 OGFOD3 WDR45B HEXDC LOC105376790 NARF TEX19 C17orf62 FOXK2 UTS2R
esv2762577	Chr.17:82244836 - 82838431 on Build GRCh38	Gain+Loss	CD7 SECTM1 CSNK1D MIR4525 OGFOD3 WDR45B FN3K LOC101929511 HEXDC LOC105376790 TEX19 ZNF750 FOXK2 UTS2R TBCD RAB40B LOC101929552 NARF C17orf62 LOC105376791 FN3KRP
esv21913	Chr.17:81828123 - 83103548 on Build GRCh38	Gain+Loss	CSNK1D DUS1L WDR45B MIR6787 LOC101929511 NOTUM HEXDC LOC105376790 B3GNTL1 TEX19 RFNG CCDC57 UTS2R SNORD134 ANAPC11 NARF RAC3 LOC105376791 P4HB CD7 FN3K ARHGDIA PYCR1 ZNF750 PPP1R27 ASPSCR1 C17orf62 FN3KRP DCXR MIR4525 OGFOD3 MCRIP1 MYADML2 LRRC45 FOXK2 SLC16A3 GPS1 SIRT7 STRA13 LOC105371944 METRNL SECTM1 MAFG-AS1 NPB FASN MAFG PCYT2 TBCD RAB40B ALYREF LOC101929552

More Information

Additional Information:

For this assay, SNP(s) [rs114624894] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

• Set Membership: Intragenic, Exonic, DGV Variation

Panther Classification:

Molecular Function -

chaperone

Gene Ontology Categories:

Function(s)

protein binding