Hs02590233_cn

• Gene Symbol: C17orf62
• Assay Reference Genome Location: Chr.17:82443396 on build GRCh38
• Cytoband: 17q25.3

Target Gene Details

• Entrez Gene ID: 79415
• Gene Name: chromosome 17 open reading frame 62
• Gene Aliases: -
• Location: Chr.17:82442586-82450831 on Build GRCh38
• Assay Gene Location: Within Exon 7

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
C17orf62	NM_001033046.3	7	1342	NP_001028218.1
	NM_001100407.2	8	1392	NP_001093877.1
	NM_001100408.2	6	1300	NP_001093878.1
	NM_001193653.1	8	1612	NP_001180582.1
	NM_001193654.1	7	1562	NP_001180583.1
	NM_001193655.1	7	1506	NP_001180584.1
	NM_001193657.1	8	1559	NP_001180586.1
	NR_036514.1	6	1268
	NR_036516.1	6	1219
	NR_036517.1	5	1177
	NR_036518.1	4	1103
	XM_006722293.2	6	2067	XP_006722356.1
	XM_011523606.2	7	2199	XP_011521908.1
	XM_017025072.1	6	2247	XP_016880561.1
	XM_017025073.1	5	2205	XP_016880562.1
	XM_017025074.1	8	1292	XP_016880563.1
	XM_017025075.1	8	2061	XP_016880564.1
	XM_017025076.1	9	1289	XP_016880565.1
	XM_017025077.1	8	1453	XP_016880566.1
	XM_017025078.1	7	1250	XP_016880567.1
	AF269290.1	2	1470	AAG23173.1
	AK027743.1	4	1043	BAB55335.1
	AK054876.1	7	1154	BAB70818.1
	AK056342.1	6	1175	BAB71156.1
	AK074950.1	8	1489
	AK090484.1	6	3413	BAC03465.1
	AK092865.1	4	2401
	AK225389.1	7	1248
	BC003595.1	7	1226	AAH03595.1
	BC004171.2	7	1226	AAH04171.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv1160502	Chr.17:82411695 - 82526070 on Build GRCh38	Deletion	FOXK2 C17orf62 HEXDC NARF OGFOD3
esv3641424	Chr.17:82434625 - 82462586 on Build GRCh38	Gain	C17orf62 HEXDC NARF
nsv1062980	Chr.17:82408938 - 82687942 on Build GRCh38	Gain	FOXK2 RAB40B C17orf62 HEXDC WDR45B MIR4525 NARF OGFOD3
nsv428351	Chr.17:81152631 - 83064073 on Build GRCh38	Gain	BAHCC1 HGS CCDC57 GCGR MIR6787 ACTG1 SIRT7 FAAP100 MIR4740 DCXR TEX19 SLC38A10 NOTUM MIR4525 LOC105371925 C17orf89 ANAPC11 OGFOD3 CSNK1D FOXK2 RAB40B ARL16 MAFG P4HB SLC16A3 SNORD134 GPS1 AATK FASN MAFG-AS1 B3GNTL1 LOC105371944 STRA13 MIR3186 TEPSIN MIR6786 LOC101929511 ALYREF DUS1L CEP131 TMEM105 FSCN2 UTS2R HEXDC LINC00482 AATK-AS1 OXLD1 FN3KRP NARF MYADML2 ARHGDIA TSPAN10 SECTM1 FN3K CD7 ZNF750 CCDC137 MCRIP1 PPP1R27 SLC25A10 LOC105376790 TBCD LOC100130370 C17orf62 MRPL12 PCYT2 LOC101929552 PYCR1 NPLOC4 NPB RAC3 LOC105376791 ASPSCR1 WDR45B RFNG PDE6G LRRC45
nsv1067160	Chr.17:82381853 - 82446450 on Build GRCh38	Loss	C17orf62 HEXDC LOC105376790 OGFOD3
nsv469561	Chr.17:82251148 - 82472274 on Build GRCh38	Loss	SECTM1 CD7 C17orf62 UTS2R HEXDC LOC105376790 NARF OGFOD3 TEX19 CSNK1D LOC101929511
nsv833574	Chr.17:82419054 - 82579254 on Build GRCh38	Gain	FOXK2 C17orf62 HEXDC NARF
esv21913	Chr.17:81828123 - 83103548 on Build GRCh38	Gain+Loss	CCDC57 MIR6787 SIRT7 DCXR TEX19 NOTUM MIR4525 ANAPC11 OGFOD3 CSNK1D FOXK2 RAB40B MAFG P4HB SLC16A3 SNORD134 GPS1 FASN MAFG-AS1 B3GNTL1 LOC105371944 STRA13 LOC101929511 ALYREF DUS1L UTS2R HEXDC FN3KRP NARF MYADML2 ARHGDIA SECTM1 FN3K CD7 ZNF750 MCRIP1 PPP1R27 LOC105376790 TBCD C17orf62 PCYT2 LOC101929552 PYCR1 NPB RAC3 LOC105376791 METRNL ASPSCR1 WDR45B RFNG LRRC45
esv2762577	Chr.17:82244836 - 82838431 on Build GRCh38	Gain+Loss	FOXK2 RAB40B C17orf62 UTS2R HEXDC FN3KRP NARF LOC101929552 TEX19 SECTM1 FN3K CD7 ZNF750 LOC105376791 WDR45B MIR4525 LOC105376790 OGFOD3 TBCD CSNK1D LOC101929511
nsv1067194	Chr.17:82294731 - 82653129 on Build GRCh38	Gain	FOXK2 SECTM1 CD7 C17orf62 UTS2R HEXDC WDR45B LOC105376790 NARF OGFOD3 TEX19

More Information

Additional Information:

For this assay, SNP(s) [rs114624894] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

• Set Membership: Intragenic, Exonic, DGV Variation

Panther Classification:

Molecular Function -

chaperone

Gene Ontology Categories:

Function(s)

protein binding