accessibility menu, dialog, popup

UserName
Viewing profile as user:

Please enter the information below and press OK to send your cart to Core Services for purchase.

    

System Message

OKCancel
LOADING ...
See other IRF3 CNV Assays ›
Gene Symbol
IRF3
Assay Reference Genome
Location

Chr.19:49662661 on build GRCh38
Cytoband
19q13.33
Assay ID Hs02616014_cn
Size
Availability Made To Order
Catalog # 4400291
Price
Your Price
Online offer:
Check your price ›

Assay Details

Target Gene Details

Entrez Gene ID:

 3661

Gene Name:

 interferon regulatory factor 3

Gene Aliases:

 IIAE7

Location:

 Chr.19:49659569-49665875 on Build GRCh38

Assay Gene Location:

 Overlaps Intron 5 - Exon 6
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
IRF3 NM_001197122.1 NP_001184051.1
NM_001197123.1 NP_001184052.1
NM_001197124.1 NP_001184053.1
NM_001197125.1 NP_001184054.1
NM_001197126.1 NP_001184055.1
NM_001197127.1 NP_001184056.1
NM_001197128.1 NP_001184057.1
NM_001571.5 NP_001562.1
NR_045568.1
XM_006723197.1 XP_006723260.1
XM_006723198.1 XP_006723261.1
XM_006723200.1 XP_006723263.1
XM_006723201.1 XP_006723264.1
XM_006723202.2 XP_006723265.1
XM_017026766.1 XP_016882255.1
XM_017026767.1 XP_016882256.1
AB102884.1 BAD89413.1
AB102887.1 BAD89416.1
AK057577.1
AK292027.1
AK314421.1
BC000660.2 AAH00660.1
BC009395.2 AAH09395.1
BC071721.1 AAH71721.1
BP347627.1
CB961512.1
HM357932.1
HM357933.1
HM357934.1
HM357935.1
HM357936.1
HM357937.1
Z56281.1 CAA91227.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv469715 Chr.19:49572544 - 49730286 on Build GRCh38 Gain+Loss RRAS MIR5088 IRF3 BCL2L12 ADM5 PRMT1 PRR12 PRRG2 CPT1C SCAF1 NOSIP
nsv833865 Chr.19:49572545 - 49730286 on Build GRCh38 Gain+Loss RRAS MIR5088 IRF3 BCL2L12 ADM5 PRMT1 PRR12 PRRG2 CPT1C SCAF1 NOSIP
nsv9739 Chr.19:47901840 - 50143063 on Build GRCh38 Gain+Loss FAM83E AP2A1 SNAR-D PPP1R15A LOC101059948 FCGRT RPL13A ALDH16A1 MIR6800 NUCB1 SPHK2 RPL18 FGF21 CGB1 NOSIP C19orf68 SNAR-A3 NUP62 PLEKHA4 ELSPBP1 FUT1 HSD17B14 FTL PIH1D1 SCAF1 SNORD34 TSKS TULP2 CCDC155 SNORD33 DBP PRMT1 PPFIA3 LHB ZNF114 MIR6799 DKKL1 CGB3 MIR150 LMTK3 SPACA4 RUVBL2 KDELR1 CGB5 RRAS FUT2 CYTH2 ADM5 SNAR-C1 HRC IL4I1 SNORD32A SNAR-A8 GFY SLC17A7 TEAD2 BSPH1 SNAR-B2 SNAR-G2 FLT3LG SNORD35B SNAR-G1 PTOV1-AS1 RCN3 KCNA7 CCDC114 LIG1 IZUMO1 KCNJ14 MIR4750 SNORD35A VRK3 IRF3 BCL2L12 FUZ SNAR-A10 CARD8-AS1 MIR4324 SNAR-A12 SNAR-A13 SNAR-C3 PRRG2 ATF5 SNAR-A2 MIR4749 SIGLEC11 MED25 LOC105447645 FLJ26850 TBC1D17 PLA2G4C SNRNP70 EMP3 GRIN2D TRPM4 SNAR-C2 LIN7B ZNF473 MAMSTR LOC105372430 GRWD1 SNAR-B1 BCAT2 GYS1 CARD8 RPS11 SNAR-A6 PTH2 CGB7 MIR6798 RASIP1 SNAR-A4 LOC100287477 MIR4751 PTOV1-AS2 AKT1S1 C19orf73 SNAR-A9 CD37 PNKP SNAR-A5 NUCB1-AS1 LOC101928295 MIR5088 SYNGR4 PLA2G4C-AS1 SEC1P TMEM143 SNAR-C4 SNAR-C5 CABP5 BAX SNAR-A7 DHDH CGB8 CA11 SLC6A16 PTOV1 NTN5 SNAR-A14 SIGLEC16 SNAR-A11 SULT2B1 SNAR-A1 PRR12 NTF4 CPT1C CGB2
nsv470150 Chr.19:49618821 - 49856789 on Build GRCh38 Gain RRAS MIR5088 TSKS IRF3 BCL2L12 AP2A1 FUZ ADM5 PRMT1 PTOV1-AS1 MIR4749 PTOV1 MED25 MIR6799 MIR6800 PTOV1-AS2 PRR12 CPT1C SCAF1
nsv833864 Chr.19:49551790 - 49733819 on Build GRCh38 Gain RRAS MIR5088 IRF3 BCL2L12 ADM5 PRMT1 PRR12 PRRG2 CPT1C SCAF1 NOSIP
nsv953600 Chr.19:49555044 - 49938043 on Build GRCh38 Deletion TSKS AP2A1 PRMT1 PTOV1-AS1 MIR6799 MIR6800 MIR4751 PTOV1-AS2 MIR4750 AKT1S1 PNKP RRAS MIR5088 IRF3 BCL2L12 FUZ ADM5 PRRG2 ATF5 NOSIP MIR4749 PTOV1 MED25 NUP62 IL4I1 TBC1D17 PRR12 CPT1C SCAF1
nsv1160655 Chr.19:49489110 - 49841830 on Build GRCh38 Deletion SNORD34 TSKS SNORD35B AP2A1 SNORD33 PRMT1 PTOV1-AS1 FCGRT RPL13A RCN3 RPS11 MIR6799 MIR6800 MIR150 SNORD35A RRAS MIR5088 IRF3 BCL2L12 FUZ ADM5 PRRG2 NOSIP MED25 SNORD32A PRR12 CPT1C SCAF1
nsv828578 Chr.19:49560777 - 49680548 on Build GRCh38 Loss RRAS IRF3 BCL2L12 PRMT1 PRR12 PRRG2 SCAF1 NOSIP
nsv579908 Chr.19:49645135 - 49663393 on Build GRCh38 Loss IRF3 SCAF1

Back To Top

More Information


Additional Information:

For this assay, SNP(s) [rs74980832] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Set Membership:

 Intragenic Non-exonic DGV Variation

Panther Classification:

Gene Ontology Categories:

Function(s) Process(es)


Back To Top

Related Products