Hs02630483_cn

• Gene Symbol: TMEM256
• Assay Reference Genome Location: Chr.17:7403032 on build GRCh38
• Cytoband: 17p13.1

Target Gene Details

• Entrez Gene ID: 254863
• Gene Name: transmembrane protein 256
• Gene Aliases: C17orf61
• Location: Chr.17:7402974-7404131 on Build GRCh38
• Assay Gene Location: Overlaps - Exon 4

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
TMEM256	NM_152766.3			NP_689979.1
	BC030270.2			AAH30270.1
	BM749297.1
	CB140450.1
	EB386328.1

Target Gene Details

• Entrez Gene ID: 100529211
• Gene Name: TMEM256-PLSCR3 readthrough (NMD candidate)
• Gene Aliases: C17orf61-PLSCR3
• Location: Chr.17:7389727-7404131 on Build GRCh38
• Assay Gene Location: Within Intron 2

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
TMEM256-PLSCR3	NR_037719.1
	AK055822.1
	AK290117.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
esv2422288	Chr.17:6789933 - 7646709 on Build GRCh38	Deletion	TEKT1 ACADVL MIR497HG SHBG TMEM95 SLC2A4 POLR2A ZBTB4 GPS2 MIR497 KCTD11 TNK1 CLDN7 SLC16A11 TMEM102 BCL6B TNFSF12 GABARAP ACAP1 SNORD10 PLSCR3 EIF5A ALOX12 NLGN2 NEURL4 ASGR1 RNASEK-C17orf49 TMEM256 SAT2 DVL2 LOC107983988 EIF4A1 MIR195 LOC100996842 RNASEK YBX2 ATP1B2 ASGR2 TNFSF13 SNORA67 SENP3 FXR2 SLC35G6 FBXO39 SENP3-EIF4A1 CD68 SLC16A13 SOX15 ALOX12-AS1 MIR324 TMEM256-PLSCR3 ELP5 C17orf49 CTDNEP1 SNORA48 TNFSF12-TNFSF13 CHRNB1 SPEM1 MPDU1 ALOX12P2 PHF23 DLG4 FGF11 C17orf74 CLEC10A
nsv523672	Chr.17:7379825 - 7549660 on Build GRCh38	Loss	POLR2A ZBTB4 TMEM256-PLSCR3 TNK1 TNFSF12-TNFSF13 TMEM256 CHRNB1 SPEM1 TMEM102 LOC107983988 TNFSF12 SLC35G6 FGF11 C17orf74 PLSCR3 NLGN2
esv1007381	Chr.17:7391600 - 7405025 on Build GRCh38	Deletion	TMEM256-PLSCR3 PLSCR3 TMEM256
nsv952118	Chr.17:7174582 - 7456981 on Build GRCh38	Deletion	YBX2 ACADVL TMEM95 SLC2A4 GPS2 KCTD11 TNK1 CLDN7 TMEM102 GABARAP ACAP1 PLSCR3 EIF5A NLGN2 NEURL4 MIR324 ASGR1 TMEM256-PLSCR3 ELP5 CTDNEP1 TMEM256 DVL2 CHRNB1 SPEM1 LOC107983988 PHF23 DLG4 FGF11 C17orf74
nsv470575	Chr.17:7388788 - 7432736 on Build GRCh38	Loss	TMEM256-PLSCR3 C17orf74 TNK1 PLSCR3 TMEM256 NLGN2 SPEM1 LOC107983988
nsv574322	Chr.17:7010333 - 7689462 on Build GRCh38	Loss	ACADVL MIR497HG SHBG TMEM95 SLC2A4 POLR2A ZBTB4 GPS2 MIR497 KCTD11 TNK1 CLDN7 SLC16A11 TMEM102 BCL6B TNFSF12 GABARAP ACAP1 SNORD10 PLSCR3 EIF5A ALOX12 NLGN2 NEURL4 ASGR1 RNASEK-C17orf49 TMEM256 SAT2 DVL2 LOC107983988 EIF4A1 MIR195 TP53 LOC100996842 RNASEK YBX2 ATP1B2 ASGR2 TNFSF13 SNORA67 SENP3 FXR2 SLC35G6 SENP3-EIF4A1 CD68 SLC16A13 SOX15 ALOX12-AS1 MIR324 TMEM256-PLSCR3 ELP5 C17orf49 CTDNEP1 SNORA48 TNFSF12-TNFSF13 CHRNB1 SPEM1 WRAP53 MPDU1 PHF23 DLG4 FGF11 C17orf74 CLEC10A

More Information

• Set Membership: Intragenic, Intronic, Non-exonic, DGV Variation

Gene Ontology Categories:

Process(es)

biological_process

Function(s)

molecular_function