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See other CHD1L CNV Assays ›
Gene Symbol
CHD1L
Assay Reference Genome
Location

Chr.1:147187053 on build GRCh38
Cytoband
1q21.1
Assay ID Hs02690107_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 9557

Gene Name:

 chromodomain helicase DNA binding protein 1 like

Gene Aliases:

 ALC1, CHDL

Location:

 Chr.1:147172804-147295766 on Build GRCh38

Assay Gene Location:

 Within Intron 2
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
CHD1L XM_017002858.1 XP_016858347.1

Target Gene Details

Entrez Gene ID:

 2330

Gene Name:

 flavin containing monooxygenase 5

Gene Aliases:

 -

Location:

 Chr.1:147183963-147225798 on Build GRCh38

Assay Gene Location:

 Within Exon 10
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
FMO5 NM_001144829.2 NP_001138301.1
NM_001144830.2 7 1705 NP_001138302.1
NM_001461.3 9 1838 NP_001452.2
XM_005272946.4 9 1812 XP_005273003.1
XM_005272947.4 9 1556 XP_005273004.1
XM_005272948.4 9 1539 XP_005273005.1
XM_006711245.3 8 1475 XP_006711308.1
XM_011509350.2 9 1843 XP_011507652.1
XM_011509351.2 8 1575 XP_011507653.1
XM_017000801.1 8 1587 XP_016856290.1
XM_017000802.1 8 1357 XP_016856291.1
AK222728.1 9 1553 BAD96448.1
AK225739.1
AK314647.1 9 1766
BC035687.1 7 1378 AAH35687.1
L37080.1 9 1524 AAA67849.1
Z47553.1 9 1530 CAA87633.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv1005055 Chr.1:145642988 - 148991068 on Build GRCh38 Loss RNVU1-8 LOC101927468 RNU1-13P NBPF12 CHD1L PDE4DIP RNF115 ACP6 LOC100996517 RNVU1-1 NBPF14 RNVU1-7 RNVU1-6 LINC01138 NBPF10 NOTCH2NL RNVU1-3 TXNIP POLR3GL LOC728989 PIAS3 LOC100996763 LOC101928979 CH17-408M7.1 GPR89B ANKRD34A BCL9 CD160 POLR3C GPR89A ITGA10 NUDT17 LINC00624 GJA5 NUDT4P1 MIR6736 HYDIN2 GNRHR2 LOC284561 LOC100132057 LIX1L RBM8A MIR6077 LOC100505824 PRKAB2 GJA8 ANKRD35 PEX11B MIR5087 PDZK1 PDIA3P1 FMO5 NBPF11 NBPF13P HFE2 LOC105371226 PPIAL4G LOC105371242 PDZK1P1 NUDT4P2
dgv327n100 Chr.1:146028214 - 148860637 on Build GRCh38 Gain GJA5 RNVU1-8 NUDT4P1 HYDIN2 LOC101927468 LOC284561 LOC100132057 RNU1-13P NBPF12 MIR6077 CHD1L LOC100505824 PRKAB2 PDE4DIP GJA8 ACP6 LOC100996517 RNVU1-1 NBPF14 RNVU1-7 RNVU1-6 LINC01138 NBPF10 MIR5087 NOTCH2NL PDIA3P1 RNVU1-3 FMO5 NBPF11 LOC728989 NBPF13P LOC100996763 LOC101928979 LOC105371226 CH17-408M7.1 GPR89B PPIAL4G LOC105371242 BCL9 PDZK1P1 NUDT4P2 LINC00624
esv2761299 Chr.1:146068341 - 148926801 on Build GRCh38 Gain+Loss GJA5 RNVU1-8 NUDT4P1 HYDIN2 LOC101927468 LOC284561 LOC100132057 RNU1-13P NBPF12 MIR6077 CHD1L LOC100505824 PRKAB2 PDE4DIP GJA8 ACP6 LOC100996517 RNVU1-1 NBPF14 RNVU1-7 LINC01138 NBPF10 MIR5087 NOTCH2NL PDIA3P1 RNVU1-3 FMO5 NBPF11 LOC728989 NBPF13P LOC100996763 LOC105371226 CH17-408M7.1 GPR89B PPIAL4G LOC105371242 BCL9 PDZK1P1 NUDT4P2 LINC00624
nsv1077657 Chr.1:147010816 - 147207577 on Build GRCh38 Deletion RNVU1-8 PDIA3P1 FMO5 CHD1L PRKAB2 LOC728989 NBPF13P
nsv509457 Chr.1:145948024 - 149021821 on Build GRCh38 Insertion GJA5 RNVU1-8 NUDT4P1 HYDIN2 LOC101927468 LOC284561 LOC100132057 LIX1L RNU1-13P NBPF12 MIR6077 CHD1L LOC100505824 PRKAB2 PDE4DIP GJA8 ACP6 LOC100996517 RNVU1-1 NBPF14 RNVU1-7 RNVU1-6 LINC01138 NBPF10 MIR5087 NOTCH2NL PDIA3P1 RNVU1-3 FMO5 TXNIP POLR3GL NBPF11 LOC728989 NBPF13P HFE2 LOC100996763 LOC101928979 LOC105371226 CH17-408M7.1 GPR89B PPIAL4G LOC105371242 ANKRD34A BCL9 PDZK1P1 NUDT4P2 LINC00624
nsv1132304 Chr.1:146186094 - 148977674 on Build GRCh38 Duplication GJA5 RNVU1-8 NUDT4P1 HYDIN2 LOC101927468 LOC284561 LOC100132057 RNU1-13P NBPF12 MIR6077 CHD1L LOC100505824 PRKAB2 PDE4DIP GJA8 ACP6 LOC100996517 RNVU1-1 NBPF14 RNVU1-7 LINC01138 MIR5087 NOTCH2NL PDIA3P1 RNVU1-3 FMO5 NBPF11 LOC728989 NBPF13P LOC100996763 LOC105371226 CH17-408M7.1 GPR89B PPIAL4G LOC105371242 BCL9 PDZK1P1 NUDT4P2 LINC00624
nsv1003688 Chr.1:146036817 - 148934526 on Build GRCh38 Gain GJA5 RNVU1-8 NUDT4P1 HYDIN2 LOC101927468 LOC284561 LOC100132057 RNU1-13P NBPF12 MIR6077 CHD1L LOC100505824 PRKAB2 PDE4DIP GJA8 ACP6 LOC100996517 RNVU1-1 NBPF14 RNVU1-7 RNVU1-6 LINC01138 NBPF10 MIR5087 NOTCH2NL PDIA3P1 RNVU1-3 FMO5 NBPF11 LOC728989 NBPF13P LOC100996763 LOC101928979 LOC105371226 CH17-408M7.1 GPR89B PPIAL4G LOC105371242 BCL9 PDZK1P1 NUDT4P2 LINC00624
dgv66e199 Chr.1:146055970 - 149056514 on Build GRCh38 Deletion GJA5 RNVU1-8 NUDT4P1 HYDIN2 LOC101927468 LOC284561 LOC100132057 RNU1-13P NBPF9 NBPF12 MIR6077 CHD1L LOC100505824 PRKAB2 PDE4DIP GJA8 ACP6 LOC100996517 RNVU1-1 NBPF14 RNVU1-7 LINC01138 NBPF10 MIR5087 NOTCH2NL PDIA3P1 RNVU1-3 FMO5 NBPF11 LOC728989 NBPF13P LOC100996763 LOC101928979 LOC105371226 CH17-408M7.1 GPR89B PPIAL4G LOC105371242 BCL9 PDZK1P1 NUDT4P2 LINC00624
nsv437047 Chr.1:147171976 - 147369886 on Build GRCh38 Loss PDIA3P1 FMO5 CHD1L PRKAB2

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