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See other LIME1 CNV Assays ›
Gene Symbol
LIME1
Assay Reference Genome
Location

Chr.20:63738661 on build GRCh38
Cytoband
20q13.33
Assay ID Hs02691050_cn
Size
Availability Made To Order
Catalog # 4400291
Price 475.00
Your Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 54923

Gene Name:

 Lck interacting transmembrane adaptor 1

Gene Aliases:

 LIME, dJ583P15.4

Location:

 Chr.20:63735701-63739107 on Build GRCh38

Assay Gene Location:

 Within Exon 7
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
LIME1 NM_001305654.1 6 1117 NP_001292583.1
NM_001305655.1 6 884 NP_001292584.1
NM_017806.3 6 919 NP_060276.2
AI763397.1
AK000413.1 6 736 BAA91148.1
AK054722.1 4 1963
AY203957.1 6 1117 AAP34480.1
BC017016.1 6 684 AAH17016.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
esv2722959 Chr.20:63715664 - 63806918 on Build GRCh38 Deletion ZBTB46 LIME1 ZGPAT SLC2A4RG
nsv953308 Chr.20:63650148 - 63831847 on Build GRCh38 Deletion ARFRP1 RTEL1 STMN3 ZBTB46-AS1 RTEL1-TNFRSF6B ZBTB46 LIME1 ZGPAT SLC2A4RG TNFRSF6B
nsv586615 Chr.20:63734204 - 63741603 on Build GRCh38 Gain LIME1 ZGPAT SLC2A4RG
dgv523n27 Chr.20:63738644 - 63789659 on Build GRCh38 Loss ZBTB46 LIME1 SLC2A4RG
nsv586614 Chr.20:63725275 - 63741460 on Build GRCh38 Gain LIME1 ZGPAT SLC2A4RG
dgv7677n54 Chr.20:63736025 - 63738644 on Build GRCh38 Loss LIME1 ZGPAT
nsv1160690 Chr.20:63639552 - 63744287 on Build GRCh38 Deletion ARFRP1 RTEL1 STMN3 RTEL1-TNFRSF6B ZBTB46 LIME1 ZGPAT SLC2A4RG TNFRSF6B
esv7227 Chr.20:63715550 - 63807161 on Build GRCh38 Loss ZBTB46 LIME1 ZGPAT SLC2A4RG
nsv428381 Chr.20:63583375 - 64334167 on Build GRCh38 Gain+Loss MIR647 C20orf181 MIR941-2 SAMD10 LIME1 MIR941-4 UCKL1 MIR6813 ABHD16B RGS19 ZNF512B MIR941-5 RTEL1-TNFRSF6B MIR941-3 DNAJC5 LKAAEAR1 LOC100505771 MYT1 LINC00266-1 ARFRP1 PCMTD2 STMN3 GMEB2 TCEA2 ZBTB46 OPRL1 ZGPAT SLC2A4RG LINC00176 RTEL1 ZBTB46-AS1 PRPF6 NPBWR2 MIR1914 MIR941-1 SOX18 TNFRSF6B TPD52L2 UCKL1-AS1
nsv1059142 Chr.20:63731978 - 63798885 on Build GRCh38 Gain ZBTB46 LIME1 ZGPAT SLC2A4RG
nsv470563 Chr.20:63486715 - 63793308 on Build GRCh38 Loss ARFRP1 PTK6 STMN3 GMEB2 ZBTB46 HELZ2 LIME1 ZGPAT SLC2A4RG EEF1A2 SRMS RTEL1 PPDPF RTEL1-TNFRSF6B FNDC11 TNFRSF6B LOC100505771
dgv7681n54 Chr.20:63737667 - 63739379 on Build GRCh38 Loss LIME1
esv29394 Chr.20:63737285 - 63740490 on Build GRCh38 Loss LIME1 SLC2A4RG
dgv7678n54 Chr.20:63737451 - 63739060 on Build GRCh38 Loss LIME1
esv2758806 Chr.20:63470996 - 63745014 on Build GRCh38 Gain+Loss ARFRP1 PTK6 STMN3 GMEB2 ZBTB46 HELZ2 LIME1 ZGPAT SLC2A4RG KCNQ2 EEF1A2 SRMS RTEL1 PPDPF RTEL1-TNFRSF6B FNDC11 TNFRSF6B LOC100505771

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More Information


Set Membership:

 Intragenic Exonic DGV Variation

Panther Classification:

Molecular Function -

scaffold/adaptor protein

Gene Ontology Categories:

Function(s)


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